KEGG   Caenorhabditis briggsae (nematode): CBG_21527
Entry
CBG_21527         CDS       T01054                                 
Symbol
Cbr-vti-1
Name
(RefSeq) Protein CBR-VTI-1
  KO
K08493  vesicle transport through interaction with t-SNAREs 1
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    CBG_21527 (Cbr-vti-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cbr04131]
    CBG_21527 (Cbr-vti-1)
Membrane trafficking [BR:cbr04131]
 SNARE
  SNAP-25[N] (Qb)
   Vti1
    CBG_21527 (Cbr-vti-1)
SSDB
Motif
Pfam: V-SNARE_C V-SNARE BOS1_GOSR2_MEM11-like_N Sec20 SNARE LMBR1 NUP160_helical Uso1_p115_C ALMT
Other DBs
NCBI-GeneID: 8574616
NCBI-ProteinID: XP_002632620
WormBase: CBG21527
UniProt: A0AAE9EQF7 A8Y0B6
LinkDB
Position
IV:<1864961..>1866517
AA seq 221 aa
MSQTVEQLSGFEKQYSLQTAEITSKIGRVHTLPSSERAGAVQEIRKSLEEVNDLLDQMEL
VVRELESNTTERTKYELRVRSYQSDKKQLDSELEKAIRRVREEADRDELLAFDDQLDADR
QEDQLIANTQRLERSTRRVQDAHRIAVETEQIGTEMLSNLASQRETIGRSRDRLRQSNAD
LGRANKTLGSMIRRAIQNRLLLLIVSFLLAFMFLYIVYKAI
NT seq 666 nt   +upstreamnt  +downstreamnt
atgtcgcaaaccgttgaacagctcagcggtttcgagaagcagtattcgcttcaaaccgcc
gaaatcacatcaaaaatcggaagagttcacactctgccgagctctgaacgagccggcgcc
gtacaggaaatccgaaaaagtttggaagaagtcaacgatttgttggatcagatggagttg
gttgtcagagagttggagtcgaataccacggaacgtacaaaatacgaattgcgcgttcga
agctatcaatctgacaaaaaacaattggattcggagctagaaaaagcgattcgacgagtg
agagaagaagccgatcgagatgaattattggcgtttgatgatcagttggacgctgatcgg
caggaagatcagctgattgccaatacgcaaagattggagcgatcgactcgacgggtacaa
gatgctcatcggattgcagtggagactgagcagatcggcacggagatgctgtccaacctg
gcgagtcaacgagaaacaatcggccgatcgcgggatcgtcttcgccaatcgaatgccgac
ttgggacgagccaacaagactttgggatcgatgattcgtcgtgcgattcagaatcgctta
ttgctcttaattgtttcgtttttgcttgctttcatgttcttgtacattgtttataaggct
atttga

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