Caenorhabditis briggsae (nematode): CBG_21809
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Entry
CBG_21809 CDS
T01054
Name
(RefSeq) Protein CBG21809
KO
K05656
ATP-binding cassette, subfamily B (MDR/TAP), member 9
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr02010
ABC transporters
cbr04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CBG_21809
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
CBG_21809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbr04131
]
CBG_21809
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbr02000
]
CBG_21809
Membrane trafficking [BR:
cbr04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
CBG_21809
Transporters [BR:
cbr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
CBG_21809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_25
AAA_29
RsgA_GTPase
AAA_16
UBA2_C
DEAD
GST_C_4
Motif
Other DBs
NCBI-GeneID:
8577611
NCBI-ProteinID:
XP_002635616
WormBase:
CBG21809
UniProt:
A8Y0V2
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All DBs
Position
V:complement(<2501181..>2506626)
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AA seq
785 aa
AA seq
DB search
MRPLFRKMLMLIHFVLDVSITICSLGLYAPGWHFNLDDIFKTFHFAHYSYWASPLDYVVL
CLLRQVSLLIAIILIRRGKSKKLRRWMLIYDILGILGYIVAVVKLLAFDETGTMMSYPGI
YMSTGSAVFLTFSLPIAIRYALLIKETEEVGYERLQSESRENTNVENGSTHSASTSSECN
TENEEEDDAVTREEKEKRLPLSKHLWQIMKLCGKQWKWFTAAYSLLLIDCILNLVQPALY
SQMMSTAIQMKSFDVLKTACVDLAIVQFSAATCNTVRYICMQYAERLTARNIRVGLFKAI
LHQDISFFDENKTGQLMSRITHDSESISNSLPAYIATATRNLVMIFGSAPIMLYCSWQLS
IGTFITFPIAILVTNYYGSIVEKLSEQENDATAASNETVEEVVSGIRSFAAEKMEYMRYT
RNTDAWFKISIKTVVLTTFYNYFFATMWNIKDLVVYLYGGYLTLQGRMAPEALLTYAFYQ
WRLHAALNEFSSLFSDVMKTIGSSRKVIHIMNRIPELDYEVGSENPDVVGNIIFENVEFA
YPTRKTANILNGISLSIEPGKTVALVGPSGNGKSTLVSLLQLFYSPQSGRILLDGTPIQQ
IDHRHYHTKIALVAQEPTLFSGTIRENILYGIEDGTDDDMMRVSEMANVHEFVSKMEKGY
DTTCGEKGVQMSGGQKQRIAIARALIRNPRVLILDEATSALDAESESMVQEALNRCAKER
TVLVIAHRLSTVRRADRIAVIEKGSVTEMGTHDDLMKNRDGLYFKLVQKQLGTRIDEEEE
KPIVV
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgcgacctctatttcggaagatgttgatgcttatccattttgttttggatgtttccatt
acaatatgctcacttggactctatgctcccggatggcatttcaatctcgatgacatcttc
aaaactttccattttgctcattactcctactgggcgtctccattggattacgtggtttta
tgtcttcttcgtcaagtgtctcttctgattgcgattatcctcataagacggggaaaatca
aagaagctccgaagatggatgttgatttacgatattctcggaattcttgggtacatcgta
gccgttgtgaaattgttggcatttgacgagactggaacaatgatgagctatccaggaatc
tatatgagcacaggatctgcagtgttcctcacattctctttgccaattgccattcgttat
gcattattgattaaagaaactgaagaggtcggatacgagagattgcagagtgagagccga
gaaaatacaaatgtggaaaatggatccacacattctgcctcgacgtcatctgaatgcaac
actgagaatgaagaagaagatgatgcggtcacaagagaagagaaagagaaacgactaccg
ttgtccaagcatctttggcagattatgaagctatgtggaaaacagtggaaatggttcaca
gctgcttattcccttttgctcattgattgcattctgaatcttgtacaaccagctctatac
agtcagatgatgtcaactgctatccaaatgaaatcgttcgatgttcttaaaacagcttgc
gtggatcttgccatcgttcagttctcagcagctacatgtaacactgtcagatatatttgt
atgcaatacgctgaacgattgactgctcgaaacattcgagtcggattgttcaaggctatt
cttcatcaggatatttcgttttttgatgaaaataaaacgggacagctcatgtccagaatc
actcatgactctgaatcgatctccaattctcttccagcctacattgcaaccgctaccaga
aacctcgtcatgattttcggatctgctccaattatgctttattgctcatggcagttatca
atcggtacttttatcacattcccaatcgctatactggtgaccaactactatggatcaatt
gttgaaaaattgtctgaacaggaaaacgatgcgactgccgcgtcgaatgaaaccgtcgaa
gaagtagtatccggcatccgatccttcgccgccgaaaaaatggaatacatgagatacacg
aggaacacggatgcttggtttaaaatcagtatcaagactgttgttttgacaactttttat
aactatttcttcgcgaccatgtggaatattaaagacctggtagtctatctctatggtggt
tatcttactcttcaaggacgaatggccccagaagctcttctcacctacgccttctaccaa
tggagacttcacgcagccctaaatgaattcagttccctcttttccgatgttatgaagaca
attggatcgtccagaaaagtcatccacatcatgaatcgaatcccagaattggattacgaa
gttggaagtgaaaatccagatgtcgtcggaaacatcattttcgaaaacgtcgaatttgcc
tatccaactaggaaaactgcgaatatcttgaatggaatcagtctatcaattgagccagga
aaaactgttgcactggttggaccaagtggaaatggaaaatcgacgctcgtctctctactc
caactgttttattctccacaatctggaagaattcttctggatggaacaccgattcagcaa
attgatcatcgtcattatcacacgaagattgctttggttgctcaagaaccaactcttttt
tccggaaccattcgggaaaatattctctacggaattgaggatggaaccgatgacgacatg
atgagggtttctgaaatggccaatgttcacgagttcgtatcgaaaatggagaagggatac
gatacaacatgcggcgagaaaggagtacaaatgtccggagggcaaaagcaaaggatcgcc
atcgctcgagctctcattcggaatcctcgagttctaatcttggatgaggccacatctgcg
ttggacgcagaatccgaatcgatggttcaagaagctttgaatagatgtgccaaagagaga
actgttttagtgattgcccatcgtctgtccactgttcgacgtgccgatcgaatcgctgtc
atcgagaagggaagcgtgacggaaatgggaactcatgatgatttgatgaagaatcgggat
ggtctctacttcaaattggttcagaaacagttgggaaccagaatagacgaagaggaggag
aagccaattgttgtctaa
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