KEGG   Caenorhabditis briggsae (nematode): CBG_22089
Entry
CBG_22089         CDS       T01054                                 
Symbol
Cbr-npp-13
Name
(RefSeq) Protein CBR-NPP-13
  KO
K14309  nuclear pore complex protein Nup93
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CBG_22089 (Cbr-npp-13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbr03019]
    CBG_22089 (Cbr-npp-13)
Messenger RNA biogenesis [BR:cbr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     CBG_22089 (Cbr-npp-13)
SSDB
Motif
Pfam: Nic96 Nup84_Nup100
Other DBs
NCBI-GeneID: 8580866
NCBI-ProteinID: XP_002638871
WormBase: CBG22089
UniProt: A8Y1I0
LinkDB
Position
I:2248568..2267619
AA seq 785 aa
MLHFEEILGRVDHQGLTKLFGASLFQSQDVDTSHNFTVRNGVEHELCGILGGSEGNWQRD
AQPVQKKMMFGERGIQIPSRQAEAHSSEETFTEDGIVEIPQAVIDDIDEEELDEDILRVK
VETDRAFFNHMLLARPAAVPMTPAQAMERDDLPTGNGTFVNKNISDRRELLFGDKLHKYL
KSQGKKSLVELMKEAVEESGTDGALADVWNDVTSVLNRKTVASRDDVTTTANLLEDACRY
LQKVFTDHMQTVVERNLEIAERGGIPGKRGLVNAFLKVGTEEPFQPEDDSIDGMPTWQVT
YHCVRAGDMQAAAETLNRLKSFPQCATLVASLNHVAKHKKLDAELKKKLKVEWRHNVGHT
KDKYKRALYAALLGGLESAALADTLENWIWFKLYPLHVDPQLTPLLFQEVQKAVSIDYGE
QYFMSNGPSEFQYFFTALWLSGQFERAIYLLHECGQRVDSVHVAILAHKLGYLRMSVKST
DEMLVVDPNDATKCHLNLARLIVAYTKNFELIDVPRSLDYWFLLKGISTPTGSDVFEMAV
SRSVYLTGQCDAILGTLTPDGRREKGLIDEYLDDPSEVINRVASDTELTGEWDQAVSLYL
LASKSTNAAKLLSSEISETLRADNKEKIGELVTVAEQFKRVQKGCQAAEYATLSLLVDLA
VLFDHCRNDNADTAYGLVFDLRLIPTEPDQVTVIVNEFHMVPQKVREVLPDMCLHLMKCL
VDHCIRQSTSLANRGANAANTSMFSSSNRYVKQIKAIVLYSATVPYKFPTHVTSKLLQLQ
ASLGF
NT seq 2358 nt   +upstreamnt  +downstreamnt
atgctgcatttcgaagaaattctgggtcgagtcgaccatcaaggcctcaccaaactcttc
ggagcgtcgcttttccaatcacaagacgtcgatacctctcacaatttcacagttcgaaat
ggtgtcgagcacgagttgtgcggtattttgggcggttccgagggcaattggcagcgtgac
gctcagccggtgcaaaagaagatgatgttcggagaacgaggaattcagattcccagccga
caagccgaggcacactccagcgaagagacgttcacagaggacggcattgtcgagattcca
caggctgtcattgatgatatcgatgaggaggagctcgacgaggacattctccgtgtcaaa
gtggaaacggaccgcgcgttcttcaaccatatgcttctggcacgtccggcggccgtacca
atgacaccagcacaagccatggagcgagatgacctacccacgggaaacggaacattcgtc
aacaagaacatcagcgatcgtcgagagcttcttttcggcgacaaactacacaaatatctg
aagtctcaaggcaaaaaatcgctagtcgagctgatgaaagaagctgttgaggagtctgga
acagacggtgctttggccgacgtctggaacgatgtcacatcggtgctgaatcgaaaaacg
gtggcgagtcgagacgacgtgacgacgacggcgaatcttctggaggatgcgtgtagatat
cttcagaaagtgttcactgatcatatgcagactgttgttgagaggaatttggaaatcgcg
gagagaggaggaattccaggcaaacgaggactggttaatgcgtttttgaaggtcggcacc
gaagagcccttccaaccagaagacgacagtatcgacggaatgccaacgtggcaagtgaca
tatcattgtgtccgtgctggagacatgcaagcagccgccgagaccctcaaccgactcaaa
tcgttcccacagtgcgcaactctggtcgcctcgctgaaccacgtggcaaaacacaagaaa
ttggatgcggagcttaagaaaaagctgaaagtcgagtggcgtcacaacgtcggccacacc
aaggacaagtacaagcgtgctctctacgccgcccttctcggcggactcgaatccgcggct
ctcgctgatactctagagaattggatctggtttaagctatacccacttcacgtcgatcca
cagttgacgccgttgctgttccaggaggttcagaaagccgtttcgattgattatggagag
caatacttcatgtcaaatggcccctccgagttccagtacttcttcacggctctctggctt
tctggacaattcgagagggctatttatctccttcacgagtgcggacaacgagtggatagt
gtacacgtggcgattctcgcacacaagttgggatatcttcggatgtcggtcaagtcgacc
gatgagatgttagtcgtcgacccgaacgacgccacgaaatgtcatctgaatctcgctcgg
ctcatcgtcgcctacacgaaaaactttgagctgatcgatgtgccacgatcgctggactat
tggttcttgcttaagggaatctcgacgcctacaggatccgacgtcttcgagatggcagtg
agccggtcggtgtatttgactggacagtgtgacgcgattctgggaacactgacgccggat
ggacgaagagagaaggggctgattgatgaatacctcgacgatccatcggaagtgatcaat
cgtgtggcgagtgacacggaactcaccggtgaatgggatcaagccgtcagtctctatctg
ctagcatccaagtccacaaacgccgccaaactgttatcatcggaaatcagtgagacactc
cgtgcggataacaaggagaagattggcgagctggttacagtagctgagcaattcaaacgc
gttcaaaagggatgtcaagcggctgagtatgccacgctgtcgttgttggtcgatctcgcg
gtgctgtttgatcactgcagaaatgataacgctgataccgcttatgggttagtttttgat
ctccgcctaatcccaaccgagccggatcaagtgaccgtaatcgtcaacgagttccatatg
gtaccacagaaggttcgagaagtgcttccagacatgtgtctccacctgatgaagtgcctc
gtcgatcactgtattcgtcagtcgacgagtctcgcgaatcgtggcgccaacgccgccaac
acctcaatgttctcctcgtcgaatcgctatgtgaagcagatcaaggcaatcgttttgtac
tcggcaactgttccatacaagttcccaacacatgtgacgtccaaacttcttcaattgcaa
gcatctcttggattctga

DBGET integrated database retrieval system