Caenorhabditis briggsae (nematode): CBG_22401
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Entry
CBG_22401 CDS
T01054
Name
(RefSeq) Protein CBG22401
KO
K13176
THO complex subunit 7
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03013
Nucleocytoplasmic transport
cbr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CBG_22401
09122 Translation
03013 Nucleocytoplasmic transport
CBG_22401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbr03019
]
CBG_22401
03041 Spliceosome [BR:
cbr03041
]
CBG_22401
Messenger RNA biogenesis [BR:
cbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
CBG_22401
Spliceosome [BR:
cbr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CBG_22401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
WIT1_2_N
Nop25
BUD22
FKBP_N_2
V_ATPase_I
F-protein
DUF6270
Motif
Other DBs
NCBI-GeneID:
8589216
NCBI-ProteinID:
XP_002647217
WormBase:
CBG22401
UniProt:
A0AAE9D313
A8Y256
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All DBs
Position
IV:<3130220..>3132037
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AA seq
208 aa
AA seq
DB search
MKDDTLTRKLIADAEGAGEDRRLQQIATFFRESRKVEEPKTAEVVKVTRALELVELSMLK
QKQIAEMNKRQALEFDSFAGEIDSEIELMYKKMETAKAELADAKIVKKNRQEYRKLVNVM
NEVPTRAETARKLEEVRDELERQHDRQKVLEAKLTDRRNHLQAFNVILSNFQRFCTEDDD
DDETGISNNGDNDDDDSASVSEKQEDEK
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgatacattgacccgaaaactgatcgccgatgccgaaggcgctggtgaggat
cgtcggctgcaacaaattgctacgtttttccgcgagagtcggaaagttgaagaaccaaag
acagctgaagtggtcaaagtgacaagagctctagaactagtggagttgtcaatgctgaaa
cagaagcaaatagcggagatgaacaagcgacaggcgctggaattcgactcgttcgctgga
gaaatcgatagtgagatcgagttgatgtacaagaagatggagacggcgaaggccgagttg
gcggatgcgaaaattgtgaaaaaaaatcgccaagaataccgaaaactggtgaatgtgatg
aatgaggtgccaacgcgagcggagaccgcccgtaagctagaagaggtccgtgatgagctg
gaacgacaacacgaccggcagaaggttctcgaagcgaagctcacggatcgccggaatcat
ttgcaggcttttaatgtgattttgtcgaatttccagaggttttgtacagaagacgatgac
gacgacgagacggggatttctaacaacggcgacaacgacgatgatgattcggcgtcagtg
agtgagaagcaggaggatgagaagtga
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