KEGG   Caenorhabditis briggsae (nematode): CBG_22401
Entry
CBG_22401         CDS       T01054                                 
Name
(RefSeq) Protein CBG22401
  KO
K13176  THO complex subunit 7
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03013  Nucleocytoplasmic transport
cbr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CBG_22401
  09122 Translation
   03013 Nucleocytoplasmic transport
    CBG_22401
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbr03019]
    CBG_22401
   03041 Spliceosome [BR:cbr03041]
    CBG_22401
Messenger RNA biogenesis [BR:cbr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     CBG_22401
Spliceosome [BR:cbr03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    CBG_22401
SSDB
Motif
Pfam: THOC7 WIT1_2_N Nop25 BUD22 FKBP_N_2 V_ATPase_I F-protein DUF6270
Other DBs
NCBI-GeneID: 8589216
NCBI-ProteinID: XP_002647217
WormBase: CBG22401
UniProt: A0AAE9D313 A8Y256
LinkDB
Position
IV:<3130220..>3132037
AA seq 208 aa
MKDDTLTRKLIADAEGAGEDRRLQQIATFFRESRKVEEPKTAEVVKVTRALELVELSMLK
QKQIAEMNKRQALEFDSFAGEIDSEIELMYKKMETAKAELADAKIVKKNRQEYRKLVNVM
NEVPTRAETARKLEEVRDELERQHDRQKVLEAKLTDRRNHLQAFNVILSNFQRFCTEDDD
DDETGISNNGDNDDDDSASVSEKQEDEK
NT seq 627 nt   +upstreamnt  +downstreamnt
atgaaagacgatacattgacccgaaaactgatcgccgatgccgaaggcgctggtgaggat
cgtcggctgcaacaaattgctacgtttttccgcgagagtcggaaagttgaagaaccaaag
acagctgaagtggtcaaagtgacaagagctctagaactagtggagttgtcaatgctgaaa
cagaagcaaatagcggagatgaacaagcgacaggcgctggaattcgactcgttcgctgga
gaaatcgatagtgagatcgagttgatgtacaagaagatggagacggcgaaggccgagttg
gcggatgcgaaaattgtgaaaaaaaatcgccaagaataccgaaaactggtgaatgtgatg
aatgaggtgccaacgcgagcggagaccgcccgtaagctagaagaggtccgtgatgagctg
gaacgacaacacgaccggcagaaggttctcgaagcgaagctcacggatcgccggaatcat
ttgcaggcttttaatgtgattttgtcgaatttccagaggttttgtacagaagacgatgac
gacgacgagacggggatttctaacaacggcgacaacgacgatgatgattcggcgtcagtg
agtgagaagcaggaggatgagaagtga

DBGET integrated database retrieval system