Caenorhabditis briggsae (nematode): CBG_22730
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Entry
CBG_22730 CDS
T01054
Name
(RefSeq) Protein CBG22730
KO
K20353
COPII coat assembly protein SEC16
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbr04131
]
CBG_22730
Membrane trafficking [BR:
cbr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
CBG_22730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCD_aECM
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
8587483
NCBI-ProteinID:
XP_045097646
WormBase:
CBG22730
UniProt:
A8Y317
LinkDB
All DBs
Position
X:complement(<16583017..>16593850)
Genome browser
AA seq
1858 aa
AA seq
DB search
MTSRISQATVFSFLIYSQFSQALSKISIGLRPYQYQYVDSDFNQKYIYEPESLRPTPIPK
EEILKEEDIPAFKTLDFLNMPSELEGSASAFRTMNIENTATIIPADVKPIVPKPKKRKTK
RKPKRKPKKMHLRRVFKTRLITTTPRPILIEENRIDEDGIETTTNVINLAPIFDADTGTS
YTPAELDKICQETVHVSKGFGISDIESFAKNNCFLIRLYYPSVTCSQINQLVGYCRENGL
INVGSMSFYWQQGLQQQQDTGQAANQQSQQSHWDFINLGGAPAPQHQWNSQAQQPQQQHQ
QPQTNYYYQQTPHQQQQPTNHNTNVIGWQKHHFSYDTTLTIHFSVPQHPAPIPQPQQTQQ
IQHQPQLPKKKTQQVVIEHTPLLPPVQNHASPAAPNFTPAPPVLTPAFHQVDSQQQQQYY
QQQVLQQVHQQHQQYANSTPGANWDQGYSQQPAAVQSTPQFQPPPVPQLGSAPPSMEVTP
EPQHKPAPAPQMAPPPTAKPTPVPIPPVLIPPSVVQMNPAPAAPKPPVVKKEEHLVITAP
VTAEEPKTKVTPTSSEDDWEKADMEIQRVDDENKRQKTAQSVEKPGESRESSSLGGSWSQ
QGSQPSERSSVEPVEIVEHPVVEDGEQKTPRVSMSDTHEVPTTIVHTAMPAFEDREETPE
AGHRNQNYSVTIDSSSSPLEAIATSTPKDKLEKRSSVSSQGTIGADRNRSSKNSKMSDNQ
RHDQDSYKNVNDFAEREDASGNNSDSTMASGRPEFVRGEARASYREYKKTYNAIVDRLNF
MRSNTTHSDYRPSSRNANPLLAAAGIRQHPAIRRESLGGRNDGRASVPLHHSQSFNENMY
HENGGRRSRVSRLDPNGRPSSRHGPGYASVNHMDPRNHYDQRAYMQQQYRHGRHSAMAGA
QVSRRPPSINGSEQYGYGHPGVGYGQEPQETSSISESEEDDENGESDDEVRGYNMQQHRA
HRGQQFLPQQSSEDDGQTLYYCGVVHVNMESWRRIIEKHGVPPEFYNLNPIEKAAFMFYT
VVFKQPYKNVDAFHNRFNREFYKYMCANLSNDDALYKICHSMQQQYLERQKQKVQAYESM
KATMFSDETSIDGQSEINSVYEESLSNYDVHNNGPLKFTCPHSFLHISNGGQMISIQPDQ
SISAVIFDDIGSAMKDIATLQIKDAAQQFKGPLVPNQSAPHTVRLYITKQIENIRASAVA
IENPEAYDVVESVLVWQLLEMMVKQQGNITGPDIAELLAKVARQPVNVQAPPQLSNITPA
LNQFTQFLLGGHIDEAVESALRNGLFADALVLTRRLFPNDERKIEAIESRFLQTRSMDNP
VTTLVSVAKGEVPPVLINPPLDDHRWSWRTHAAIILANLDQRGTALSTIHQLGRALAKRE
YDSAADFCFLVCGVLGGDKENPFTPVPTPEGEEEYRRYISLVNSDIPDNEANPKCQYGFA
LTHLHATEIFDYAMRLKPDRESLLATSVEYQTARIKYAKLLASHGFVTDAYRYCTEIARA
IWFHVTTFNPEDLLELCDLADSLLHRADVNPNETQWIYDLRSSIETGFVPQTVKQESKHS
SQDYSRNQPETIYEQPVEPSLPTPIPVPELEFIPSAFTAPIQQKPTEHIQPAEHHEEVPS
TPAGSIYQEQYSTQAETPFSFQATMEQFNPADGFTTPPDDGFSDGPLTMASSPPVPEMTP
EQSWSSVADPVNAQNHIPQQSQQQPEPDLKTEQEGSNQSQGWFKSIQTKVQKATGKNPMN
LPEDTNPTIVWDPAQNKYVGAGVESEPVAAPPPTVAAVPTAPVAGGGLRAARGASRYAKA
GLASSSSQPPAGMMAPAPPTASFGFMPAPVDDDGDAVDPFSGQANPTIQQYVQKPSND
NT seq
5577 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaagaatatcgcaagcgacggttttctcattccttatatactcccaattttca
caggcgttatcaaaaatttcaattggacttcgaccatatcaatatcaatatgtagactct
gatttcaatcaaaagtatatctatgaaccagagtcactgcgaccaacgccaattccaaaa
gaagagattttaaaagaagaagatattcctgctttcaaaacgctggattttctaaatatg
ccgtcagaactagaaggatctgcaagtgcgttccgaacaatgaatatagagaatacggct
acaataatcccagctgatgtgaaacctatagtgccaaagccaaaaaagagaaaaacgaag
aggaaaccaaagcgaaaaccaaagaaaatgcatctccgacgcgtattcaagacgaggttg
ataactaccacacctcgaccgatactaattgaagagaacagaatagatgaagatggcata
gaaaccacaacaaatgtgataaatttagcgccgatttttgacgctgacactggcacttct
tacactccagcggagctggacaagatatgccaagagacagtgcatgttagcaaaggattt
ggcatttccgatatcgaaagctttgcgaaaaataattgtttcctgattcgtttgtattat
ccgagtgttacgtgttctcaaatcaatcaactagttggatattgtagagagaatggacta
ataaatgtgggttcgatgagtttctattggcagcaaggcctgcaacaacagcaggacact
ggccaagcagcaaaccaacagtcacaacagagccattgggactttattaacctcggcgga
gcacctgcgcctcagcatcaatggaattcgcaggcgcaacagccacagcaacaacatcag
cagccgcagactaactactactatcaacagacacctcaccaacaacaacaacctactaat
cataatactaacgttattggatggcaaaaacatcatttcagttatgacacaaccctcact
attcatttttcagtacctcaacatccagctccaataccacaacctcaacaaacacaacaa
atacaacatcaaccacaattgccaaagaaaaagactcaacaagttgtgatcgagcataca
cctctcttaccaccggttcaaaatcatgcctctcctgccgctccgaacttcaccccagcg
ccacctgtactgacgcccgcatttcatcaagtggactctcaacagcagcagcagtactat
caacaacaagtccttcagcaagtacatcaacagcaccagcagtatgccaactcaacgcca
ggtgcaaattgggatcaagggtattctcaacagcccgcagctgtgcagtctacaccccaa
ttccaaccaccacctgtgccacagcttggatcggcgccaccatcgatggaagtaacaccg
gagcctcaacacaaaccagcacctgctccacagatggctccacctccaactgccaaaccg
acaccggtccccatacctccggtactgatccctccgagtgttgttcagatgaatcctgct
cccgcagctcctaaaccacctgtagtgaaaaaagaggagcatctcgtaatcactgcgcct
gttaccgctgaagagcccaagaccaaagtcacaccgacatcttctgaagacgattgggag
aaagcggacatggagattcaacgcgttgacgacgagaacaaacgccaaaaaactgcccaa
tcggtagaaaagccaggagaatcgagagagtcttcatctctaggggggtcgtggtcccaa
caaggctcacaaccttcagaaagaagttccgtggaacctgtggagattgtggagcatcca
gtggtagaagacggtgaacagaaaactccaagagtatcaatgtcggatactcatgaagta
ccgacaaccattgttcacactgcaatgcccgcttttgaggatcgtgaagagactccagaa
gctggtcaccgcaaccaaaactattcggttacaattgattctagcagcagtccattggaa
gcgattgcgacaagcacgcctaaagacaagctggaaaaaagatcatcagtttcgtctcaa
ggaaccatcggtgcagacagaaatcgctcgtccaaaaactcaaaaatgagcgacaatcaa
cgccacgaccaagacagttacaagaatgtcaacgattttgctgaaagagaagacgcttct
ggaaacaatagcgacagcacaatggcatctggaagaccggagtttgtgagaggagaggct
cgggcaagctaccgcgagtacaagaagacctacaatgccattgtagatcgtcttaacttt
atgagatccaacactacccactctgactatagaccgtcttcgaggaatgcgaatccactt
ttggctgccgccggaatacgacaacatcctgctattcgtcgtgagtcccttggaggacgt
aacgacggaagagcttctgttcctctgcatcatagtcagagcttcaacgagaatatgtat
cacgagaatggcggtagaaggagccgagtgagtcgattggatccaaatggccgtccatcg
tctcgacatggtccaggatacgcgtcggtgaaccatatggatccccgtaaccactatgat
cagcgagcatacatgcaacaacaatatcgtcatggacgtcatagtgcaatggctggagct
caggtctctcgaagaccaccatccataaatggaagtgagcagtacggatacggacatcct
ggagtgggatacggtcaggaaccacaagagacttctagcatctctgaaagcgaggaggac
gacgagaacggagagagcgatgacgaagtccgtggatacaacatgcaacagcatagagct
catcgtggacaacaattcttacctcaacagtcctctgaagacgacggacaaaccctctac
tattgtggagttgttcacgtcaacatggaatcttggcgtcgtattatagaaaagcatgga
gtccctccagagttctataacctgaatccaattgaaaaggctgcgtttatgttttacact
gtggttttcaaacaaccatataagaacgtggatgctttccacaacagattcaatcgggag
ttttacaagtacatgtgtgcaaacctttctaacgatgacgcattgtacaagatttgccat
tcaatgcaacaacaatacctggaaagacaaaaacagaaagtgcaggcttatgagtctatg
aaagcgaccatgttcagtgatgaaaccagtattgatggacaaagtgagatcaacagcgtt
tacgaagagtctctcagcaactatgacgtccacaacaatggtcccctcaaattcacatgc
ccacacagtttcttgcacatttccaatggaggacaaatgatctcgattcaaccagatcaa
tcgatttcagctgttatctttgacgacattggctcggctatgaaggatattgccacgttg
caaatcaaagatgccgcacagcagttcaaaggaccactggtgccaaatcaatctgcccca
cacactgtccgattgtacatcaccaagcaaattgagaacatcagagcttccgctgttgcg
atagagaacccggaggcgtatgatgtggtggagtctgtgttggtatggcagctgttggag
atgatggtcaagcaacaaggaaacatcacaggtcccgacattgctgaactccttgccaaa
gttgccagacagcctgttaatgttcaagctcctccacaattatccaacatcacaccggcg
ctcaatcaattcacacagtttctgctcggaggtcatatcgatgaagcagtagaaagtgct
ctccgtaatgggctcttcgctgatgcacttgttttgacccgtcgtctgtttccaaatgat
gagcgcaaaattgaagcgattgaaagccgattcctccagacaaggtcgatggacaatcca
gttacaaccctggtatcagttgcaaagggagaggtgccaccggttttgatcaacccacca
ctcgacgatcatcgttggagttggagaactcatgccgccattatccttgccaacttggat
caacgtggaaccgctctcagcacaattcaccagctgggacgtgctctcgccaaacgtgaa
tacgacagcgccgccgacttttgcttccttgtgtgtggagtgctcggaggagacaaggag
aatccattcaccccagttccaacaccagaaggtgaagaagaataccgtcggtacatttca
ttggtcaactcggatataccagataatgaagccaatccaaagtgtcaatatggatttgca
cttacccatcttcacgccactgagatatttgactacgctatgagactgaagcctgatcgc
gaatccctcttggcgacatcggtcgaatatcaaacggcacgtatcaagtacgccaagttg
cttgctagtcatggatttgtcactgacgcctacaggtattgtaccgagattgctcgtgct
atctggttccacgtgacaaccttcaatcctgaagatttgttggagttgtgtgatttggct
gattctcttcttcatagagcagatgtcaatccaaatgaaactcaatggatttacgatttg
agatcatccatcgagactgggttcgtgccacaaacagtgaagcaagaaagcaaacattcg
tctcaagactattccagaaaccagccagagacaatatatgagcagccagtggaaccgtca
cttcctactcctatccctgtgcctgagctagagttcattccctcggcattcactgctcca
atccagcaaaagcctacggagcatattcaaccagcagaacaccacgaggaagttccatcc
acgccagccggatctatttaccaggaacaatattctacacaagctgaaacccccttctcc
ttccaagctacaatggaacagttcaatccagccgacggctttaccactccaccggatgat
ggatttagtgacggaccattgacaatggcatcttctccaccagtgccggaaatgacaccc
gaacagtcatggtctagtgtcgctgatccagtaaatgctcaaaaccacatcccacaacag
agtcaacaacaacctgagccagatttaaagacggagcaagaaggcagcaatcagagtcaa
gggtggtttaagtcaatccaaaccaaggttcaaaaggccacggggaaaaaccccatgaac
cttccagaggacacaaacccaacaatcgtttgggatccggctcaaaacaagtatgtcggc
gctggagtggaatcggaacctgttgcagcaccaccaccaacagttgccgctgtaccaacc
gcaccagttgcaggaggtggattgagagctgctagaggagcatcgcgatatgccaaggct
ggactcgccagttcttcgtcacagccaccagcaggaatgatggcaccggctcctccaaca
gctagtttcggttttatgccagctcctgtcgacgatgacggtgatgctgttgatccattt
agtggacaagccaacccgacgatacagcaatacgttcaaaaaccgtcgaatgattga
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integrated database retrieval system