KEGG   Caenorhabditis briggsae (nematode): CBG_22810
Entry
CBG_22810         CDS       T01054                                 
Name
(RefSeq) Protein CBG22810
  KO
K11584  serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    CBG_22810
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cbr01009]
    CBG_22810
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbr03019]
    CBG_22810
   03036 Chromosome and associated proteins [BR:cbr03036]
    CBG_22810
Protein phosphatases and associated proteins [BR:cbr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     CBG_22810
Messenger RNA biogenesis [BR:cbr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     CBG_22810
Chromosome and associated proteins [BR:cbr03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     CBG_22810
SSDB
Motif
Pfam: B56 Sec7-like_HUS
Other DBs
NCBI-GeneID: 8580267
NCBI-ProteinID: XP_045097664
WormBase: CBG22810
LinkDB
Position
V:complement(17103706..17115538)
AA seq 531 aa
MHGAGHSLTGAPHQIPPPRTQGAATGGQQLSATANQFVDKIDPFHNKRGTSRRLRINNSS
RYNVDSAQELIQLPMIKDTASNEQPALVIEKLVQCQHVFDFYDPVAQLKCKEIKRAALNE
LIDHITSTKGAIVETIYPAVIKMVAKNIFRVLPPSENCEFDPEEDEPTLEVSWPHLQLVY
ELFLRFLESPDFQASIGKKYIDQRFVLKLLDLFDSEDPRERDFLKTVLHRIYGKFLGLRA
FIRKHINNMFLRFVYETDSFNGVGELLEILGSIINGFALPLKQEHKVFLVKVLLPLHKPK
CLSLYHAQLAYCVVQFIEKDSSLTPQVFDALLKFWPRTCSSKEVMFLGEVEEILDIIEPE
QFKKIIDPLFRQLAKCVSSPHFQVAERALYFWNNEYILSLIEDTSSLVMPIMFPALYRIS
KEHWNQTIVALVYNVLKTFMEMNGKLFDELTSTYKGERVREKQREKDRDLFWKKLEALEL
DPPAEGKEVSPSMFPEKLSDYMKRMKINWLRPSFYSTPLPTVIHFLQYIAT
NT seq 1596 nt   +upstreamnt  +downstreamnt
atgcacggagccggtcacagtttgacgggcgccccgcatcaaattccgccgccacgtact
cagggagcggcgacgggcggccagcagctctccgccaccgccaatcaattcgtcgataag
attgatccgttccacaataagcgtggcacttcgcgacggctacgcatcaacaacagcagc
cgctacaatgtcgactcggcacaggagctcattcagcttccaatgatcaaggacacggcc
agcaacgagcagccagccctggtcatcgaaaaactcgtccaatgccagcacgtctttgat
ttctacgatccggttgctcagcttaagtgtaaagaaatcaagcgagccgcccttaacgag
ctgattgatcatatcacgtcgacgaaaggcgcaatcgttgagacaatctatccggcggtg
attaagatggtcgccaagaacattttccgcgtcctgccaccgtctgaaaattgtgaattc
gatccggaagaggatgagcccactttggaggtctcctggcctcatttgcagctggtctac
gaactgttcctccgtttcctcgaatcgccggatttccaagcttccatcggaaagaagtac
attgatcaacgattcgtgctgaaactgctcgacttgttcgattcggaggatccgcgcgag
agggacttcctgaagacggtccttcatcggatttatggaaaattcttgggactgcgggcc
tttattcgtaaacatatcaataatatgtttttgagattcgtctacgagacggactcgttc
aacggcgtcggcgagcttctggagatactcggatcgattatcaacggattcgcgttgccg
ctgaaacaagagcacaaggttttcctggtcaaagtgctccttccacttcacaaacccaaa
tgtctatcgttgtatcatgctcagctcgcctactgtgtcgtccagttcatcgagaaggac
tcgtcgctcactccgcaggtcttcgatgcgctgctcaagttctggccacgtacatgcagt
agcaaggaggtgatgttccttggcgaagtggaggagatactcgacatcatcgagccggag
caattcaaaaagatcatcgatccgttgttccgtcagctagccaaatgcgtcagcagtccg
catttccaagtcgccgaacgggctctctacttttggaataacgagtatattctgtcgttg
atcgaggatacctccagtttggtgatgccaataatgttcccagccctataccgtatctcc
aaggagcactggaatcagacgatcgtcgctctggtctacaatgtgttgaaaactttcatg
gagatgaatggaaaactgttcgatgagctaacatcaacctataaaggagaacgtgttcgt
gagaaacaacgcgagaaggacagagatttgttctggaagaagctggaagcgctcgaattg
gatccgcctgccgagggaaaagaagtctcgccatcgatgtttcccgagaagctcagtgat
tatatgaagaggatgaagataaactggctccgcccctccttctacagtactcctcttcct
acagtaatccacttcctacagtatattgctacttga

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