Caenorhabditis briggsae (nematode): CBG_22959
Help
Entry
CBG_22959 CDS
T01054
Name
(RefSeq) Protein CBG22959
KO
K10756
replication factor C subunit 3/5
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03030
DNA replication
cbr03410
Base excision repair
cbr03420
Nucleotide excision repair
cbr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CBG_22959
03410 Base excision repair
CBG_22959
03420 Nucleotide excision repair
CBG_22959
03430 Mismatch repair
CBG_22959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbr03032
]
CBG_22959
03036 Chromosome and associated proteins [BR:
cbr03036
]
CBG_22959
03400 DNA repair and recombination proteins [BR:
cbr03400
]
CBG_22959
DNA replication proteins [BR:
cbr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
CBG_22959
DNA Replication Termination Factors
ELG1-RFC complex
CBG_22959
Chromosome and associated proteins [BR:
cbr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
CBG_22959
DNA repair and recombination proteins [BR:
cbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
CBG_22959
Check point factors
HRAD17(Rad24)-RFC complex
CBG_22959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
Metallophos
AAA
DNA_pol3_delta2
Rad17
RuvB_N
AAA_24
AAA_22
AAA_30
AAA_11
AAA_14
AAA_16
AAA_19
AAA_5
SLFN-g3_helicase
AAA_assoc_2
DUF815
RCF1-5-like_lid
AAA_7
DEAD
ResIII
AAA_2
ATPase_2
PhoH
Mg_chelatase
AAA_28
AAA_25
ABC_tran
Motif
Other DBs
NCBI-GeneID:
8585038
NCBI-ProteinID:
XP_002643044
WormBase:
CBG22959
UniProt:
A8Y3K6
LinkDB
All DBs
Position
III:13976816..13986982
Genome browser
AA seq
551 aa
AA seq
DB search
MSIEKKVFDVQHFCKRHLQIKNDQIYTKFELFSLIDLIIDEFRKEPTLAEISPPVRIVGD
IHGQHDDLVRLLNCKNEGNTASIDDRKPSYAFSTKKIPNFQNFVFQILFPKQYVLLRGNH
ETKVINFRYGFRHEILRRLTSKRDAQEVWERFNDAFSFMPLACLVGHKILCMHGGISPDL
VSLDAIRMIQRPLIDVNHNRLAQDLLWADPEDFERMLPSTTVVSNLPWVEKYRPSKLNEL
VAHEQVVKTLTKFIENRTLPHLLFYGPPGTGKTTTVLAAARKMYHPSKMSSMVLELNASD
ERGIDVVRNTIVNFAQTKGLQAFASASDKDSVPFKLVILDEADAMTKDAQNALRRVIEKY
TDNVRFCIICNYLASIIPAIQSRCTRFRFAPLDQSLIVPRLDFIVKSEGLQMTPDGREAL
LRVSKGDMRTVINTLQSTAMSFEVVSESTVYQCIGQPTPAEMKKVVTLLLNQTAKTCMNK
IKKSLFENGYALQDVITHLHDLAFSMDIPDSAMSAIIVGLGEVEENLSTGCSNETQLAAV
VAAFFEAKSCV
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatcgaaaaaaaggttttcgatgttcaacacttttgtaagcgtcatttgcaaatc
aaaaacgatcaaatctacacaaaattcgagcttttctcactcatcgatttgatcatcgat
gagtttcgaaaagagccgacgctggcagaaatctccccgccggttaggatcgtcggagac
attcatgggcaacacgacgatcttgtacgccttttgaattgtaaaaatgaaggaaatact
gcttcgattgatgacagaaagccaagctatgcgttttctaccaagaaaatcccaaatttt
caaaatttcgtcttccagatcctgtttcccaagcaatacgtccttctacgtggcaatcat
gagacaaaagtgataaatttcagatatgggtttaggcacgaaatcctccgccgtctgacg
tcgaaaagagacgctcaggaggtttgggaacgattcaacgacgcgttttcgtttatgcca
ttagcctgtttggttggacacaaaattctttgtatgcacggaggaattagtccggattta
gtgtctctggatgctattcgaatgattcaacgcccgttaatcgatgttaaccataatcgt
ctagctcaagacttgttgtgggcggatccagaggattttgagagaatgcttcccagtaca
acagtcgtctcgaatttgccatgggtggagaaatatcggccgagcaagctgaatgaactt
gtcgcacacgaacaagtggtgaaaaccttgacgaaatttatcgagaatcgcactctaccg
catctgctgttctacggaccgcctggaaccggaaagacgacgacggtgttggcggcggcg
cgtaaaatgtaccatccatcgaaaatgtcgtcgatggtgctggaattgaacgcttccgat
gagcgtggtatcgatgtagtcagaaacacaattgtcaacttcgctcaaaccaaaggactt
caagcgtttgcgagtgcctcggacaaggatagcgtcccgtttaagcttgtgatccttgat
gaggctgatgcgatgaccaaggatgcgcagaatgcgttgagaagagtaatcgaaaagtac
accgacaacgtgcgcttctgcatcatatgcaactatctggcctccattatccctgccatt
caatcccgttgcacccgtttccgtttcgcccctctcgaccaatcactcatcgtcccccgt
ctcgatttcatcgtcaaatctgaaggattacagatgacaccagacggtcgagaagcgctg
ttgagagtttccaaaggagacatgcgtactgtaatcaacacccttcaatccactgcaatg
tcatttgaggtggtctccgagtctacagtataccagtgtattgggcagccgacgccggcg
gaaatgaagaaggttgtgactttactgctgaatcaaaccgccaaaacctgtatgaataag
atcaagaagagcctctttgagaatggatacgccctgcaggatgtgataactcatttacac
gatttggcattctctatggatattccggattccgcgatgtctgcaataatcgttggatta
ggagaagtcgaggagaatctgtcgactggatgctcaaatgagacacaattggctgcggtt
gtcgccgcgtttttcgaggccaaatcatgtgtgtga
DBGET
integrated database retrieval system