Caenorhabditis briggsae (nematode): CBG_23064
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Entry
CBG_23064 CDS
T01054
Symbol
Cbr-vps-36
Name
(RefSeq) Protein CBR-VPS-36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
CBG_23064 (Cbr-vps-36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbr04131
]
CBG_23064 (Cbr-vps-36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cbr04147
]
CBG_23064 (Cbr-vps-36)
Membrane trafficking [BR:
cbr04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
CBG_23064 (Cbr-vps-36)
Exosome [BR:
cbr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CBG_23064 (Cbr-vps-36)
Exosomal proteins of colorectal cancer cells
CBG_23064 (Cbr-vps-36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
HTH_24
PH-GRAM_MTMR6-like
Motif
Other DBs
NCBI-GeneID:
8578406
NCBI-ProteinID:
XP_002636411
WormBase:
CBG23064
UniProt:
A0AAE9F8D9
LinkDB
All DBs
Position
V:<10085830..>10087202
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AA seq
383 aa
AA seq
DB search
MNRLTWYTPGESTEELLCQAGHVGIYEGDLKQTQFEQGTVSLTMQRIIWADSSDPDRRLV
LHHSLVISMEKHHKSMFSKGGKVVVRLEKPKPGSVGPVNSSQYDTIRLVFRHGGEDDFFK
KYEDAVRRKTWQRSSSGSSSSGSRASSNLRSVGISGIERRLAENHQKTHETITQAFDDMS
KLMETAREMVAISKSISEKVRSRKGEISEDETVQFKSYLLSLGVSDPVTKSTFVGSDSEY
FQSLAKEITDVLYQHIKENGGMCALPEVYCRINRARGMELLSPEDVMNACGALSRINSPL
ELHRFPSGVLVVQLKSASMESTVAQTLEFVSKLERASANELAESLGITVILARERLLAAE
ESGQICRDDSIEGLLFYPNRFMD
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtttgacgtggtacacacctggagagagcaccgaagaactgctctgtcaagct
ggacatgtgggtatctacgagggtgatttaaaacagactcaatttgagcaaggtacggtt
tcattgactatgcaacgcattatatgggcagattcgtcggatcctgaccgccgacttgtc
cttcatcattcattagtgatttcaatggagaaacatcacaaatccatgttcagtaaagga
ggaaaagtcgttgtgagactcgaaaaacctaaacctggaagtgttggaccagttaactca
agtcaatacgatacgattcgattagtattccgccatggaggagaagatgattttttcaaa
aaatatgaggatgcagtcagaagaaaaacatggcaaaggtcgagttccggttccagttca
agtggttctcgcgctagcagcaatctacgctcggtgggaatatctggaatcgaaagaaga
ctggccgagaaccatcagaagacacatgagaccatcacacaggcatttgatgatatgtcg
aaacttatggaaacagcaagggaaatggttgcgatttcaaaaagtatttcggagaaagtt
aggtcacgaaaaggagaaatcagcgaggacgagacagttcaatttaaatcatatcttcta
tcgctcggagtttctgacccggtcaccaaatcaacattcgttggatcggactccgagtac
ttccagagtcttgccaaagaaatcaccgatgtgctttatcaacatatcaaagaaaacgga
ggaatgtgtgcactgccagaagtgtactgtagaataaatcgggctcgaggaatggaatta
ttatcaccggaagatgtgatgaatgcttgtggtgcactgagccgcatcaactctccattg
gaattgcacagatttccatcgggagttcttgttgttcaattgaaatcagcatctatggag
agtactgtagcccaaacgctagagtttgtttcgaaactggaaagagcatcagccaacgaa
ctagccgagtcactagggattactgtcattttagcaagagaaagattgttagctgccgaa
gaatctggtcaaatatgtcgtgacgactcgatcgaaggacttcttttctaccctaatcgg
ttcatggattga
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