Caenorhabditis briggsae (nematode): CBG_23076
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Entry
CBG_23076 CDS
T01054
Symbol
Cbr-pptr-2
Name
(RefSeq) Protein CBR-PPTR-2
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CBG_23076 (Cbr-pptr-2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cbr01009
]
CBG_23076 (Cbr-pptr-2)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbr03019
]
CBG_23076 (Cbr-pptr-2)
03036 Chromosome and associated proteins [BR:
cbr03036
]
CBG_23076 (Cbr-pptr-2)
Protein phosphatases and associated proteins [BR:
cbr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
CBG_23076 (Cbr-pptr-2)
Messenger RNA biogenesis [BR:
cbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
CBG_23076 (Cbr-pptr-2)
Chromosome and associated proteins [BR:
cbr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
CBG_23076 (Cbr-pptr-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
GDE_C
Motif
Other DBs
NCBI-GeneID:
8578416
NCBI-ProteinID:
XP_002636421
WormBase:
CBG23076
UniProt:
A8Y4R8
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All DBs
Position
V:10022613..10024474
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AA seq
556 aa
AA seq
DB search
MIPADAPPPASIGRVNNYGGGPMIPRRERRQSSSMFNISQNRELQKLPSIKDAEGSEKET
LFIQKLRQCCVVFDFANDALSDLKFKEVKRAALNELVDYVSAASKGTLSDAVYPEAINMF
STNLFRPLSPPTNPIGAEFDPDEDEPTLEAAWPHLQLVYEFFLRFLECPDFQSQVAKRYI
DQNFILRLLMIMDSEDPRERDFLKTTLHRIYGKFLGHRAYIRKQINNIFYSFIYETERHN
GIAELLEILGSIINGFALPLKEEHKTFLLRVLLPLHKVKSLSVYHPQLAYCVVQFIEKDS
SLTEPVINGMLRFWPKQHSPKEVMFLNELEEVLDVIEPVEFQKIMIPLFTQIARCVSSPH
FQVAERALYYWNNEYVMSLVADNARAIIPIMFPVLFKNSKSHWNKTIHGLIYNALKMFME
MNQKLFDECSQAYQKERTNEKTQNEEKEKMWDNIEKRAMGNPQYMEVKALFARFNPDDII
CTRQNGTDEATKSSTELSKEEILNNAVGVSSLKEDRDFGPNHKQSDFPPDEQTTRALGEY
KRHDQFLKKVTSSDEQ
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgatacctgccgatgcaccaccacccgcaagtattgggcgagtgaataattacggtgga
ggtccgatgattcctcgacgagaacgccgtcagtccagcagcatgttcaacatctcccaa
aacagagagctgcaaaaactaccatccataaaagatgccgagggaagcgagaaagagact
ctgttcatccagaagttacgacagtgttgtgtcgtttttgactttgccaacgatgctctc
agcgatttgaaattcaaagaagtcaagcgagctgcattgaacgaactcgtcgactacgtt
tccgctgcttccaaaggcaccctttccgatgccgtttacccggaggccatcaacatgttt
tctacgaatctgttccgtcctttgagtcctccaacaaatccgattggcgctgaatttgac
ccagatgaggatgagccaactttagaagccgcgtggccacatcttcagttggtctacgag
ttcttcctgcgattcctcgagtgcccagactttcaatcacaagtagctaagagatacatc
gatcagaacttcattctccgtcttctcatgatcatggacagtgaggatccacgagaacgc
gacttccttaaaacaacgctacacagaatatacggaaaattccttggacatcgtgcatat
attcggaaacaaatcaacaacattttctactcattcatctacgaaactgaacgacataac
gggatcgccgagttactcgaaatccttggaagtattattaatggatttgcccttcctctt
aaagaagaacacaagacattcttactgcgagttctcctaccattgcataaagtcaaatca
ctctcggtctatcatcctcaactcgcctactgcgtcgtacaattcatcgagaaagattct
tctctgactgaacctgtaatcaatggaatgctcagattttggccgaaacagcacagtcca
aaagaggtcatgtttttgaatgagttggaagaagttctcgatgtgattgaacctgttgaa
ttccaaaagattatgattccactgttcacccaaattgctcgatgtgtgagtagtcctcac
ttccaagttgccgaacgggcgttatactattggaacaatgaatatgtgatgtctctggtt
gctgataatgcgcgtgctattatccccatcatgtttccagttctgttcaaaaacagcaag
tcacactggaacaagaccatccacggactcatctacaacgctctaaaaatgttcatggaa
atgaaccagaaattgttcgacgaatgttcgcaggcttatcaaaaggagagaaccaatgaa
aaaacacaaaatgaagaaaaagagaaaatgtgggataacattgaaaagagagcgatggga
aatccacagtacatggaagtcaaggccctgttcgctcgcttcaacccagatgatattatc
tgtacccgacagaatggaacagatgaagcaacaaaatcatcaaccgagcttagtaaagaa
gaaatattgaacaatgctgtgggagtgagttcgttgaaagaagatcgcgacttcgggccg
aatcataaacagtctgattttcctccagacgagcaaacgacgagagctctcggcgagtac
aagcgtcacgatcagttcctgaaaaaagtgacgagctccgacgaacagtga
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