Caenorhabditis briggsae (nematode): CBG_23104
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Entry
CBG_23104 CDS
T01054
Symbol
Cbr-erfa-3
Name
(RefSeq) Protein CBR-ERFA-3
KO
K03267
peptide chain release factor subunit 3
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CBG_23104 (Cbr-erfa-3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbr03019
]
CBG_23104 (Cbr-erfa-3)
03012 Translation factors [BR:
cbr03012
]
CBG_23104 (Cbr-erfa-3)
Messenger RNA biogenesis [BR:
cbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
CBG_23104 (Cbr-erfa-3)
Translation factors [BR:
cbr03012
]
Eukaryotic type
Release factors
CBG_23104 (Cbr-erfa-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
Motif
Other DBs
NCBI-GeneID:
8578438
NCBI-ProteinID:
XP_045097834
WormBase:
CBG23104
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Position
V:9941230..9943080
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AA seq
561 aa
AA seq
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MSNWNVNANSFVPNPNARPFVPGQPYTPPTPEQPIVEPAEGISYFPLILFIENSDWEEQA
DPSPVPAQQETVSSPVEEPTPAAPVAESAPPKKEPTPEEDVIAPLAKKFQRTVYVDDGSH
KEHINIVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTND
EEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIAGATQADLAVLVRILEMMSFF
EIYFQVISARRGEFETGFDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKE
IEGKLTPYLRKLGFNPKTDITYIPCSGLTGSFIKDRPSATEGSWYTGPCFIEFIDELLPS
FKRDFNGPVRCIVCEKYSEMGTVIIGKMESGCVQKGDTLVVMPNKQPVQVLQIWADDVET
DRVVAGDNIKFKLKGIEESELQAGFIICSPDSLAKTGRIFDAEVLVLEHKSIIASGYSCV
LHIQSAVEEVTVKGVIATIDKKTGEKKRAKFVKQDEKCIMRLESAESFVLEPFKEFPYLG
RFTLRDEGKTIAIGKVLKVIE
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaactggaacgtaaacgcaaactcgttcgttccgaacccaaacgctcggccattt
gtacctggacagccatacacaccaccaactcccgaacagccaatcgtggaaccagcagaa
ggtatatcatatttcccgctcattttatttattgaaaattcagattgggaagagcaagct
gatccatcaccagttccagcacaacaagaaactgtctcatcgccggttgaagaacctact
cctgctgcacctgttgctgagtccgcaccaccaaagaaggagccaacaccagaagaagat
gtaattgcacctctcgccaaaaagtttcaacggactgtctacgttgatgatggatcccat
aaggagcatatcaacattgttttcgttggacacgtcgatgctggaaaatcaacaattgga
ggtcaacttatgttcttgactggaatggttgacaaacggacattggaaaagtatgagaga
gaagccaaagaaaaaggacgtgagagttggtatctgtcttggtgcatggacacaaatgat
gaggaaagagaaaagggaaagacagtagaagttggacgtgcttactttgaaaccgaaaag
cgtcatttcactattcttgatgcaccaggtcacaagtctttcgttccaaatatgatcgct
ggagctactcaagcagatttggccgttttggtgagaattctagagatgatgtcattcttt
gaaatctattttcaggttatctctgctcgccgaggagagttcgaaactggattcgaccgt
ggaggtcaaactcgtgagcattctatgcttgtgaaaaccgctggtgtgaaacatcttgtc
attctggttaacaaaatggacgacccaaccgttaaatgggaggaggagagattcaaagaa
atcgaaggaaagctcaccccatatcttagaaagctcggtttcaatccaaaaactgatatc
acatacattccatgctctggacttactggttcattcatcaaggacagaccgtctgcaaca
gaaggaagttggtacactggaccatgcttcattgaatttattgatgagctgcttccatca
ttcaagcgcgattttaatggaccagttcggtgtatcgtttgtgaaaagtattctgaaatg
ggaactgtcatcattggaaagatggaatccggatgtgttcaaaagggagatactcttgtt
gtcatgccaaataagcaaccagttcaagttctacaaatttgggcagatgatgtggagact
gatcgtgtcgtcgctggcgataacattaaattcaagctgaagggaattgaagagagcgag
ttgcaggcaggattcatcatttgctctcctgattcacttgctaaaacaggacgcatcttc
gatgccgaggttctagtgctcgagcacaaatcaatcattgcgtctggatactcgtgtgta
cttcacatccagtctgctgtagaggaagtcacagtgaagggagtcattgccacaattgat
aagaagactggcgagaagaagcgcgcaaagttcgtcaagcaggacgaaaaatgtatcatg
aggctagaaagcgctgaatcattcgttctcgagcctttcaaggagttcccataccttgga
agattcactctcagagatgaaggaaaaaccatcgccatcggaaaggttctcaaagttatt
gagtaa
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