Caenorhabditis briggsae (nematode): CBG_23152
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Entry
CBG_23152 CDS
T01054
Symbol
Cbr-lgc-36
Name
(RefSeq) Protein CBR-LGC-36
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04080
Neuroactive ligand-receptor interaction
cbr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
CBG_23152 (Cbr-lgc-36)
04082 Neuroactive ligand signaling
CBG_23152 (Cbr-lgc-36)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cbr04040
]
CBG_23152 (Cbr-lgc-36)
Ion channels [BR:
cbr04040
]
Ligand-gated channels
GABA-A
CBG_23152 (Cbr-lgc-36)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
8578476
NCBI-ProteinID:
XP_002636481
WormBase:
CBG23152
UniProt:
A8Y4K8
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Position
V:9773332..9775809
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AA seq
535 aa
AA seq
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MLLRYPNLILILILILIIPVQTEEFKFRIENVKYQRPGSIRSKRDTFVRRESGVAQNVTH
LLNDVLNNYDQHFRPGFKSGKPTKVYIDLFIRTMGPVADLAYTYSFNCYFRQKWTDDRLH
FNNSGIGFRQLSLSMAMLDKIWKPDTYFWNGAGSYVHGITTPNRLVRLETDGTILYSSRI
TVKAKCQMDMSRYPLDKQACRLIIGSYAYSSDEVQYKWRIMGEDNGVKIDYESIADLPQF
SLSGFKVYEAANLTRDKEYSALEVRFYFDRHFGYFLMNFYVPCALVVLLCWVAFFTKREA
TAERIGIGITNVLTIVLISLDSKSDSPKVDSPTALEVYIWICYLTHLICMVEFTVVHYHT
KYNTGDPEIQEVERERLRQIIKQIPKNTNNRSYPSFKRRNAAQPVSITRSLPNKTTRFMS
VRHPKKSEQFESIQLMRKISHMETTNTNVIENEVESSLNLESIRQENVGWRLYYWMIDHN
IKTDPFGVAQNSISRIDKISVVVAPLIFILTIALYYDFYVNRQFKFHFDNDFRNF
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgcttcttcgatatcctaatctcattttgatactaatattgattctgataatacctgtt
caaaccgaagaattcaagtttagaattgaaaacgtcaaatatcaaagaccaggtagtatc
cgttctaaacgagatacgtttgtcagaagggaatctggagttgctcaaaacgtcacccat
cttctgaatgatgttctcaacaactatgatcaacatttccggcctggattcaaatcagga
aaaccaaccaaagtttacattgatcttttcattcgaacaatgggtccagtcgctgatctg
gcatacacctactccttcaattgctattttcgccaaaaatggacagatgatagattacac
tttaataatagcggcattggctttcgacaactttctctgagtatggctatgctcgataaa
atctggaagcctgatacgtacttctggaatggagctggaagttatgttcatggaatcaca
actccgaatcgtctagtgcgattggaaaccgatggaacaattttatactcgagtagaatt
acagtgaaagccaaatgtcaaatggacatgagtcgttatccacttgacaagcaagcatgc
cgtctgataattggttcatatgcttattcatctgatgaagtacaatacaaatggagaata
atgggagaggacaatggagtaaaaatcgactatgaaagcattgctgaccttccacagttc
tctttatccggattcaaagtttatgaagctgctaatttgacaagagataaagagtattct
gctttggaagttcgattttattttgatcgccattttggatacttcttgatgaacttctat
gtcccatgtgcacttgttgtgttgttatgctgggtggcattcttcacaaaacgagaagca
actgccgaaagaatcggaatcggcatcacaaacgtgctgactattgtgttgatatctctg
gatagcaaatcagactctcccaaagttgatagtcccacagctctcgaagtttacatttgg
atttgttatcttacacatttgatttgcatggtggagtttacagtagtccattatcacact
aaatacaacacgggagacccggagattcaagaagtcgagagagaacgattgagacaaata
attaagcaaattccaaaaaatacaaacaatcgatcatatccctcatttaaacgtcgaaat
gctgctcaaccagtgtcaataacgagatctcttccaaataaaacaactcgatttatgtca
gttcgtcatccgaaaaagagtgagcaattcgagtcaattcagttgatgagaaagataagt
catatggaaactacgaatacgaatgtgattgagaatgaagttgaaagtagtttgaatctt
gaatcgattcgtcaggaaaatgttggatggcgattgtattactggatgattgatcacaat
atcaaaacggacccattcggggtggctcaaaattccatcagccgaatcgacaagatttct
gtcgttgtggctccactaatattcattttgacgattgcgttgtattatgatttttatgtc
aacagacagttcaagtttcatttcgataatgattttaggaatttttag
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