Caenorhabditis briggsae (nematode): CBG_23167
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Entry
CBG_23167 CDS
T01054
Symbol
Cbr-snf-11
Name
(RefSeq) Protein CBR-SNF-11
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
CBG_23167 (Cbr-snf-11)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbr02000
]
CBG_23167 (Cbr-snf-11)
Transporters [BR:
cbr02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
CBG_23167 (Cbr-snf-11)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
8578489
NCBI-ProteinID:
XP_002636494
WormBase:
CBG23167
UniProt:
A0AAE9JK13
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Position
V:9723311..9725839
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AA seq
609 aa
AA seq
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MVEAATVAEREQWSSWADFIMSCIGYAIGLGNVWRFPYLCYQNGGGAFLIPYCISLVFCG
APLFILETSWGQLLSVGGLGMFKICPIFKGVGIAAAVMAFWLNIYYIVVLSWAATYLYNS
FTMTDVPWKNCDHSWNTPNCRSEYVKIPCDSNRTIAEFFNVKVLTHDHIHEYKKQFFVGD
KINWTVCSTADLSVVSPVKEFWNHRVLGISAGLEHPGGIRWDLAFFLLIVWIICYLCIFK
GVKWTGKVVYLTASFPYMMLFCLLIRGLTLEGAGVGLEFYLKPDFSKLLESKVWVDAVTQ
VFFSYGLGLGALVALGSYNKFNNNVYKQALTVCFVNSGTSVFAGFVIFSFIGFMATQQEK
SVAEVAQAGPGLLFLAYPSGILQLPYTQFWSCLFFLMVLFLGVDSQFCTMEGFFTAIIDE
FPQIRQKKYGREIFVGVICIISYLIGLTTVTEGGFYVFQLFDFYAASGWALLWLLFFECI
AISWSLGIDRWYEHMKSMIGYYPSGWWKFCWVFATPAVCFGVLLFGLIKYQPLRIDAYNY
DYPVWGHVFGWFLSLSSMLCIPGYAIWIWFRTPGTVQEKIKLLCRPDIEIKGAMENAENL
EMADYTHQA
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggtagaggccgctacggtggccgaaagggagcaatggtcctcatgggccgattttata
atgagttgtatcggttacgccattggtcttggcaacgtctggcgtttcccatatctctgt
tatcaaaatggaggaggcgccttcctcattccgtactgcatctcgttggtcttctgtgga
gcacctctctttattctggaaacatcatggggacagcttctatctgttggtggattggga
atgttcaaaatttgcccaatcttcaaaggagtcggaatcgcagcagcagtcatggcattc
tggttgaacatttattacattgttgtcctctcctgggcagccacttacttgtacaattct
ttcacaatgactgatgtcccatggaaaaactgcgaccactcgtggaacactccaaactgc
cgatccgaatacgtcaagattccatgtgatagtaaccgaacaatcgctgaattcttcaat
gtcaaagttttgacccatgatcatattcatgagtacaaaaagcaatttttcgttggagac
aaaatcaattggactgtctgttctactgcggatctttctgttgtctctccggtaaaagag
ttctggaatcatcgtgttcttggaatctccgctgggctggaacatcctggaggaattcgt
tgggatctcgctttcttccttctcattgtttggattatttgctatctgtgcattttcaaa
ggagtcaaatggactggaaaagttgtataccttactgcctcattcccttatatgatgctc
ttctgtctactcattcgtggattgactctagaaggagctggtgttggactggaattctac
ctaaaaccggattttagtaaactgctagaatctaaagtttgggttgatgctgtaactcaa
gtcttcttctcttatggtcttggtctcggagcattggttgcacttggaagttataataag
ttcaataacaatgtctacaaacaagctctcaccgtctgctttgtcaacagtggaacctct
gtttttgccggattcgtaattttctcattcattggtttcatggccactcaacaagaaaaa
agtgttgctgaagtcgctcaagctggtcccggtcttctcttccttgcttatccatctgga
attcttcaacttccttacactcagttctggtcttgtctctttttcctgatggttcttttc
cttggagtcgactctcaattctgcacaatggaaggattcttcaccgcaatcatcgacgag
ttccctcaaattcgtcagaaaaaatacggtcgagagatattcgtcggagtgatctgtatt
atttcatacctgattgggttgactactgtaactgaaggtggattctacgttttccaacta
ttcgacttctacgctgcttccggatgggctcttctttggcttttattcttcgaatgtatc
gctatttcttggagtttgggaatcgatcgttggtatgaacacatgaagagtatgattggg
tattatccaagtgggtggtggaaattctgctgggtgttcgctaccccagctgtttgcttc
ggagttctcttgttcggattgatcaaataccaaccacttcgtattgacgcctacaattac
gactacccagtctggggacatgtcttcggatggttcttgtctctctcatctatgctttgc
attcctggatacgccatttggatttggttcagaacacctggaactgttcaagagaaaatc
aaactgctttgccgaccagatattgagataaagggtgccatggaaaacgcggagaacttg
gaaatggctgattatactcatcaagcttag
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