Caenorhabditis briggsae (nematode): CBG_23249
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Entry
CBG_23249 CDS
T01054
Symbol
Cbr-nphp-4
Name
(RefSeq) Protein CBR-NPHP-4
KO
K16478
nephrocystin-4
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cbr03037
]
CBG_23249 (Cbr-nphp-4)
Cilium and associated proteins [BR:
cbr03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
CBG_23249 (Cbr-nphp-4)
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NCBI-GeneID:
8578553
NCBI-ProteinID:
XP_045097805
WormBase:
CBG23249
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Position
V:complement(9423534..9428940)
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AA seq
1152 aa
AA seq
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MSVNDWYSLFLANRPVEMKRSGSIGKKTSCYSMYISKLKSAQVTENLRYQISAFLFDTKT
SQMFGRQCRTEWKRAERDSTCIFNETLYFYSEINDRDLLLIIEFVEEGNEHISPAVSVGW
FSTSVEKKRAVEISENRSVEIFGGTPKLLIFDKEAVLKPVGNVECSYNIHEMPPFFFQTI
PEFCIVCDKDLIPGILKDCSDGNCFDFLKIVFQYFSDEWLSTPKEMPTIPAAIDAIAIQF
KNNVPELERQITNDIEREWALKDGGNHKPKAVIMDRKLKIGVHNGYSYVTEPFTVDLEII
NASSNGTLRSRKKPIDFGKSSNWGEQLVFQATGNPRLALRNLYADPRMAIIFLLEYTFHR
EDNQSLNQTILIGWAAWTPFSDDTYTGKEVETRVSFVGGPRPNPEGVLCYKNVLNQPDSL
KPLSEKLEIFVDFKFYENGRSVHNTPTPRRSDSARVPTSRSTENVHSSRSKGSRAQIETP
KSSVPPERFPALVDTGRSTSSIDELKSINEELDRFIEEPTEIPIEEIVVAKKAVEESLPL
TSVYKIPFEDMRTSNFHRSVHSMFARLNFVQLRDRNGESPSTDDVTSKSLIDMRRERLDR
LDNAHIYFQFVAFKQLISLDAVPSKKVFFTINFYRFPEITTESMLLETMEKGEPNLLKKL
DKNGAEDESAPPGFIAKYVIEGEESKLDFLDFLASGHSCIDVWDSDSLIHLGSTIVPLRN
LYRRGREAVQLFIQCPVVDTSLDAGSKAGSVLYLRVANIGLPSGNDPSSTSVSTIRSNIN
SQRGTVVRRLTSASNRLNEEGPHSYRVHAKPLPGNSGIGLDRFLAAQRLDIQQRHEQLFA
ENSLEKIRQWNELKEGFELSDNKGAAQKFIFEEELAAYKKLRYESKPAKLLEAVFKGITT
CHQINPSFGEKVFFEFPLENPHFEPINCTIEFDDTALRPVFDEEEWKFFRTINKINTPFE
KDMMRETKERIEIYLQPGDVLFVPFIYDAFYFPSDHFSMYSTKVVFRRWDTNEPLSILDL
HIHRRSYLLQHAVTFICETSGNWEKQLLLPPMARDRRVNSVRCSDPSVKVSIRNATLQQI
IGFTTYSGDTNDRRTFLLMMYTDHYQTRLVSVYLIEKLLATWKVTILPFFNVDVRSIVGQ
TTRLHLLVHRRR
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcaacgactggtattcgttgtttctggcgaatcggccagttgaaatgaagcgg
agtggttcgataggaaagaagacgtcatgttattcaatgtacatttcaaagttaaaatcc
gcccaggtgaccgagaacttacgataccagattagcgccttcttattcgacacgaagacg
tcgcaaatgtttggaagacagtgcaggactgaatggaaacgggcggaacgagactcaact
tgtatttttaatgagacactttacttctattcagaaatcaatgatagggatcttcttctg
ataattgagttcgttgaagaaggaaacgaacacattagtccagctgtgagtgttggatgg
ttttctacaagtgtggaaaagaaaagagcagtggaaatatcagagaacagatcagttgaa
attttcggtggaactccaaaactattaatatttgataaagaagctgttctgaaaccagtc
ggaaatgtagaatgcagctacaatatccatgaaatgcccccatttttcttccaaacaatc
cccgaattttgtattgtctgtgacaaagatttgatacctggaatcctgaaagactgctcg
gatggtaattgtttcgattttttaaaaatcgtattccaatatttttcagatgaatggttg
agtactccaaaagaaatgccaacaattccagcagcaattgatgcaatagcaattcaattc
aagaataatgtgccagaattggaaagacaaataacgaatgatattgaaagagaatgggca
ctaaaagatggaggaaatcacaaaccgaaagcagttattatggacagaaaattaaagatt
ggagttcataatggatactcgtatgtcacggaaccattcacagttgatctagaaatcatc
aatgcaagttctaatggaactttaagatctcgaaagaaacctattgatttcggaaaatca
tcaaactggggagagcaactggtattccaagccactggaaacccacgattagcacttcga
aatctctacgctgatcctcgaatggctatcatatttcttctggagtacacatttcatcgc
gaggataaccagagcctaaatcaaacgatactgattggttgggcagcttggactccgttc
tccgatgatacatacactggaaaagaagttgagacgcgggttagcttcgttggaggtccc
cgaccaaatcccgaaggtgtcctttgctacaagaatgttctgaatcaaccagattcgttg
aaaccgttgagtgagaaattggaaatttttgtggatttcaaattctatgaaaatggaaga
agtgttcataatactccaacgcccagaagatcagattctgcaagagttccaacatccaga
tccactgaaaatgtccactcgagtagatcaaaaggaagtagagcgcagatagaaacgccc
aagagttccgtgcctcctgagagattccctgctcttgttgatactggaagatcaacttct
tcaatagatgaattgaaatcaatcaacgaagaattggatagattcatagaagaaccaacg
gaaattcctattgaagaaattgtggttgccaaaaaggcagtagaagaatctctaccattg
acttcagtctataaaattccgtttgaagatatgagaacttccaacttccatcgttcagtt
cattctatgtttgcgaggttgaatttcgttcaactaagagatagaaatggagaatcccca
agtactgacgatgtcacttcaaaatccctgattgatatgagaagagaaaggctggataga
ttggataatgcacatatatattttcagttcgtggctttcaaacaactgatatctcttgat
gctgtgccatccaaaaaagtattcttcactatcaacttttaccggtttcctgaaataaca
actgaatcaatgctgctggaaacaatggaaaaaggagaaccgaatcttctcaaaaaactt
gacaaaaatggagctgaagacgagtcagctccacctggattcattgcaaagtacgtaatt
gaaggagaagaaagcaaattggattttttggatttcctggcatctggacattcttgtatt
gatgtctgggattcagattctttgattcacctgggatcgactatcgtaccacttcggaat
ttgtatcgaagaggaagggaagcagttcagttgtttatacaatgtccagtagtggatacc
tcattagatgcgggatccaaagcaggatctgtgctctatttgagagtggctaatatagga
ttaccatcaggaaacgatccctcctccacatctgtgtctaccatcagaagcaacatcaac
tcgcaacgtggtacagttgtccgtcgactgacgtcagcgtcgaaccggttgaatgaagaa
ggaccacattcgtaccgagtgcacgcaaaaccgctaccaggaaacagcggaattgggctg
gatcgctttttggcagctcagagattggatattcaacagagacatgaacagttgttcgct
gagaatagtttggagaaaatccgacaatggaatgaattgaaagaaggattcgaattgtcg
gataacaaaggagcagcgcagaaattcatatttgaagaagagctggcagcttacaagaag
cttcggtatgaaagtaaaccagcgaaacttctagaagctgttttcaaaggaatcacaaca
tgtcaccaaatcaatccatcattcggagaaaaagtatttttcgagttcccactagaaaat
ccacatttcgaaccaatcaactgcaccattgagtttgatgatactgccctccgaccagtt
tttgacgaagaagaatggaagtttttcagaacaatcaacaaaataaatacgcctttcgag
aaggatatgatgagagaaactaaagaacgaatcgaaatctatctgcaaccaggagacgtg
ctcttcgttccgttcatctacgacgccttctatttccctagtgaccattttagtatgtac
tcgacaaaagtcgttttccgaaggtgggatacaaatgagcctctttctattttggatctt
catattcatcgaagaagttacctactccaacacgctgttacattcatttgtgagacttcg
ggaaactgggaaaaacaattattgcttccgcccatggctagagatagaagagtgaattcg
gttaggtgttcggatccatctgtgaaagtgtctattcggaatgcaacactccaacagatc
atcggattcacaacgtattctggagataccaacgatcgaagaacatttttgttgatgatg
tatacggatcattatcagactaggctggtttctgtttatttgattgaaaaacttctggct
acatggaaagtaactattctcccatttttcaatgttgatgttcgaagtattgttggtcaa
accacccgactacatcttttggtacatagaagaaggtaa
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