KEGG   Caenorhabditis briggsae (nematode): CBG_23249
Entry
CBG_23249         CDS       T01054                                 
Symbol
Cbr-nphp-4
Name
(RefSeq) Protein CBR-NPHP-4
  KO
K16478  nephrocystin-4
Organism
cbr  Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:cbr03037]
    CBG_23249 (Cbr-nphp-4)
Cilium and associated proteins [BR:cbr03037]
 Primary cilia and associated proteins
  Nephronophthisis-related proteins
   CBG_23249 (Cbr-nphp-4)
SSDB
Other DBs
NCBI-GeneID: 8578553
NCBI-ProteinID: XP_045097805
WormBase: CBG23249
LinkDB
Position
V:complement(9423534..9428940)
AA seq 1152 aa
MSVNDWYSLFLANRPVEMKRSGSIGKKTSCYSMYISKLKSAQVTENLRYQISAFLFDTKT
SQMFGRQCRTEWKRAERDSTCIFNETLYFYSEINDRDLLLIIEFVEEGNEHISPAVSVGW
FSTSVEKKRAVEISENRSVEIFGGTPKLLIFDKEAVLKPVGNVECSYNIHEMPPFFFQTI
PEFCIVCDKDLIPGILKDCSDGNCFDFLKIVFQYFSDEWLSTPKEMPTIPAAIDAIAIQF
KNNVPELERQITNDIEREWALKDGGNHKPKAVIMDRKLKIGVHNGYSYVTEPFTVDLEII
NASSNGTLRSRKKPIDFGKSSNWGEQLVFQATGNPRLALRNLYADPRMAIIFLLEYTFHR
EDNQSLNQTILIGWAAWTPFSDDTYTGKEVETRVSFVGGPRPNPEGVLCYKNVLNQPDSL
KPLSEKLEIFVDFKFYENGRSVHNTPTPRRSDSARVPTSRSTENVHSSRSKGSRAQIETP
KSSVPPERFPALVDTGRSTSSIDELKSINEELDRFIEEPTEIPIEEIVVAKKAVEESLPL
TSVYKIPFEDMRTSNFHRSVHSMFARLNFVQLRDRNGESPSTDDVTSKSLIDMRRERLDR
LDNAHIYFQFVAFKQLISLDAVPSKKVFFTINFYRFPEITTESMLLETMEKGEPNLLKKL
DKNGAEDESAPPGFIAKYVIEGEESKLDFLDFLASGHSCIDVWDSDSLIHLGSTIVPLRN
LYRRGREAVQLFIQCPVVDTSLDAGSKAGSVLYLRVANIGLPSGNDPSSTSVSTIRSNIN
SQRGTVVRRLTSASNRLNEEGPHSYRVHAKPLPGNSGIGLDRFLAAQRLDIQQRHEQLFA
ENSLEKIRQWNELKEGFELSDNKGAAQKFIFEEELAAYKKLRYESKPAKLLEAVFKGITT
CHQINPSFGEKVFFEFPLENPHFEPINCTIEFDDTALRPVFDEEEWKFFRTINKINTPFE
KDMMRETKERIEIYLQPGDVLFVPFIYDAFYFPSDHFSMYSTKVVFRRWDTNEPLSILDL
HIHRRSYLLQHAVTFICETSGNWEKQLLLPPMARDRRVNSVRCSDPSVKVSIRNATLQQI
IGFTTYSGDTNDRRTFLLMMYTDHYQTRLVSVYLIEKLLATWKVTILPFFNVDVRSIVGQ
TTRLHLLVHRRR
NT seq 3459 nt   +upstreamnt  +downstreamnt
atgtcggtcaacgactggtattcgttgtttctggcgaatcggccagttgaaatgaagcgg
agtggttcgataggaaagaagacgtcatgttattcaatgtacatttcaaagttaaaatcc
gcccaggtgaccgagaacttacgataccagattagcgccttcttattcgacacgaagacg
tcgcaaatgtttggaagacagtgcaggactgaatggaaacgggcggaacgagactcaact
tgtatttttaatgagacactttacttctattcagaaatcaatgatagggatcttcttctg
ataattgagttcgttgaagaaggaaacgaacacattagtccagctgtgagtgttggatgg
ttttctacaagtgtggaaaagaaaagagcagtggaaatatcagagaacagatcagttgaa
attttcggtggaactccaaaactattaatatttgataaagaagctgttctgaaaccagtc
ggaaatgtagaatgcagctacaatatccatgaaatgcccccatttttcttccaaacaatc
cccgaattttgtattgtctgtgacaaagatttgatacctggaatcctgaaagactgctcg
gatggtaattgtttcgattttttaaaaatcgtattccaatatttttcagatgaatggttg
agtactccaaaagaaatgccaacaattccagcagcaattgatgcaatagcaattcaattc
aagaataatgtgccagaattggaaagacaaataacgaatgatattgaaagagaatgggca
ctaaaagatggaggaaatcacaaaccgaaagcagttattatggacagaaaattaaagatt
ggagttcataatggatactcgtatgtcacggaaccattcacagttgatctagaaatcatc
aatgcaagttctaatggaactttaagatctcgaaagaaacctattgatttcggaaaatca
tcaaactggggagagcaactggtattccaagccactggaaacccacgattagcacttcga
aatctctacgctgatcctcgaatggctatcatatttcttctggagtacacatttcatcgc
gaggataaccagagcctaaatcaaacgatactgattggttgggcagcttggactccgttc
tccgatgatacatacactggaaaagaagttgagacgcgggttagcttcgttggaggtccc
cgaccaaatcccgaaggtgtcctttgctacaagaatgttctgaatcaaccagattcgttg
aaaccgttgagtgagaaattggaaatttttgtggatttcaaattctatgaaaatggaaga
agtgttcataatactccaacgcccagaagatcagattctgcaagagttccaacatccaga
tccactgaaaatgtccactcgagtagatcaaaaggaagtagagcgcagatagaaacgccc
aagagttccgtgcctcctgagagattccctgctcttgttgatactggaagatcaacttct
tcaatagatgaattgaaatcaatcaacgaagaattggatagattcatagaagaaccaacg
gaaattcctattgaagaaattgtggttgccaaaaaggcagtagaagaatctctaccattg
acttcagtctataaaattccgtttgaagatatgagaacttccaacttccatcgttcagtt
cattctatgtttgcgaggttgaatttcgttcaactaagagatagaaatggagaatcccca
agtactgacgatgtcacttcaaaatccctgattgatatgagaagagaaaggctggataga
ttggataatgcacatatatattttcagttcgtggctttcaaacaactgatatctcttgat
gctgtgccatccaaaaaagtattcttcactatcaacttttaccggtttcctgaaataaca
actgaatcaatgctgctggaaacaatggaaaaaggagaaccgaatcttctcaaaaaactt
gacaaaaatggagctgaagacgagtcagctccacctggattcattgcaaagtacgtaatt
gaaggagaagaaagcaaattggattttttggatttcctggcatctggacattcttgtatt
gatgtctgggattcagattctttgattcacctgggatcgactatcgtaccacttcggaat
ttgtatcgaagaggaagggaagcagttcagttgtttatacaatgtccagtagtggatacc
tcattagatgcgggatccaaagcaggatctgtgctctatttgagagtggctaatatagga
ttaccatcaggaaacgatccctcctccacatctgtgtctaccatcagaagcaacatcaac
tcgcaacgtggtacagttgtccgtcgactgacgtcagcgtcgaaccggttgaatgaagaa
ggaccacattcgtaccgagtgcacgcaaaaccgctaccaggaaacagcggaattgggctg
gatcgctttttggcagctcagagattggatattcaacagagacatgaacagttgttcgct
gagaatagtttggagaaaatccgacaatggaatgaattgaaagaaggattcgaattgtcg
gataacaaaggagcagcgcagaaattcatatttgaagaagagctggcagcttacaagaag
cttcggtatgaaagtaaaccagcgaaacttctagaagctgttttcaaaggaatcacaaca
tgtcaccaaatcaatccatcattcggagaaaaagtatttttcgagttcccactagaaaat
ccacatttcgaaccaatcaactgcaccattgagtttgatgatactgccctccgaccagtt
tttgacgaagaagaatggaagtttttcagaacaatcaacaaaataaatacgcctttcgag
aaggatatgatgagagaaactaaagaacgaatcgaaatctatctgcaaccaggagacgtg
ctcttcgttccgttcatctacgacgccttctatttccctagtgaccattttagtatgtac
tcgacaaaagtcgttttccgaaggtgggatacaaatgagcctctttctattttggatctt
catattcatcgaagaagttacctactccaacacgctgttacattcatttgtgagacttcg
ggaaactgggaaaaacaattattgcttccgcccatggctagagatagaagagtgaattcg
gttaggtgttcggatccatctgtgaaagtgtctattcggaatgcaacactccaacagatc
atcggattcacaacgtattctggagataccaacgatcgaagaacatttttgttgatgatg
tatacggatcattatcagactaggctggtttctgtttatttgattgaaaaacttctggct
acatggaaagtaactattctcccatttttcaatgttgatgttcgaagtattgttggtcaa
accacccgactacatcttttggtacatagaagaaggtaa

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