Caenorhabditis briggsae (nematode): CBG_23262
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Entry
CBG_23262 CDS
T01054
Symbol
Cbr-pyc-1
Name
(RefSeq) Protein CBR-PYC-1
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr00020
Citrate cycle (TCA cycle)
cbr00620
Pyruvate metabolism
cbr01100
Metabolic pathways
cbr01200
Carbon metabolism
cbr01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CBG_23262 (Cbr-pyc-1)
00620 Pyruvate metabolism
CBG_23262 (Cbr-pyc-1)
Enzymes [BR:
cbr01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
CBG_23262 (Cbr-pyc-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PYC_OADA
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
HMGL-like
Dala_Dala_lig_C
BSH_RND
BSH_CusB
BSH_YknX
NQRA_N
ATPgrasp_YheCD
ATP-grasp_3
BSH_YhbJ
ATP-grasp_4
RnfC_N
RimK
Motif
Other DBs
NCBI-GeneID:
8578565
NCBI-ProteinID:
XP_045097802
WormBase:
CBG23262
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Position
V:complement(<9387300..>9391422)
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AA seq
1166 aa
AA seq
DB search
MRFARIPPIFANVVRQTQHRNYANGVIKPREFNKVMVANRGEIAIRVFRALTELNKTSVA
IYAEQDKNSIHRLKADESYLVGKGLPPVAAYLTIDQIIETALKHDIDAIHPGYGFLSERS
DFAAACQNAGIVFIGPSPDVMARMGDKVAARQAAIEAGVQVVPGTPGPITTADEAVEFAK
QYGTPIILKAAYGGGGRGIRRVDKLEEVEEAFRRSFSEAQAAFGDGSLFVEKFVERPRHI
EVQLLGDHHGNIVHLYERDCSVQRRHQKVVEIAPAPALPEGVREKILADALRLAKHVGYQ
NAGTVEFLVDQKGNYYFIEVNARLQVEHTVTEEITGVDLVQAQIRIAEENHTIHTTGSAI
QCRVTTEDPAKGFQPDSGRIEVFRSGEGMGIRLDSASAFAGSVISPHYDSLMVKVIASAR
NHPNAAAKMIRALKEFRIRGVKTNIPFLLNVLRQPSFLDASVDTYFIDEHPELFQFKPSQ
NRAQKLLSYLGEVKVNGPTTPLATDLKPAAVSPPIPYIPAGAKPPAGLRDVLVQKGPAEF
AKEVRKTPGCMITDTTFRDAHQSLLATRVRTYDMAAISPFVAQSFNGLFSLENWGGATFD
VSMRFLHECPWERLQTLRRLIPNIPFQCLLRGANAMGYSNYPDNVIYKFCDLAVKNGMDV
FRVFDSLNYLPNLLVGMEAVGKAGGVVEAAIAYTGDVTDKSRDKYDLKYYLNLADQLVKA
QAHILSIKDMAGVLKPEAAKLLIGALRDKFPDVPIHVHTHDTSGAGVAAMLECAKAGADV
VDAAVDSMSGMTSQPSMGAIVASLQGTKHDTGLSLDDISKYSAYWESTRQLYAPFECATT
MKSGNADVYKHEIPGGQYTNLQFQAFSLGLGPKFDEVKRMYREANLALGDIIKVTPSSKI
VGDLAQFMVQNNLTRETLVDRADDLSFPKSVVDFMQGNVGQPPYGFPEPLRTKVLRGKPK
VDGRPGENAKPVDLDALKTELEEKHGRKLTEEDVMSYSMFPSVFDEFETFRQQYGPVDKL
PTRLFLTGLEIAEEVDVEIESGKTLAIQLLAEGKLNKRGEREVFFDLNGQMRSIFVVDKE
ASKEIVTRPRALPGVRGHIGAPMPGDVLELKIKEGDKVTKKQPLFVLSAMKMEMVIDSPI
AGTVKAIHAAQGTKCTAGDLVIEIEP
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgcggttcgcccgcattccaccgattttcgccaatgtcgttcggcagacacaacaccgg
aattatgcgaatggagttatcaagccacgagagtttaacaaggtcatggttgccaatcgt
ggagaaatcgcgattcgtgtgttccgtgcgctcaccgagttgaacaaaacatctgtggct
atctatgcggaacaggataaaaattcgattcaccgtctcaaagctgatgaatcgtacctc
gttggaaagggactcccaccggttgctgcctatctgacgattgatcagatcatagagaca
gctctcaagcacgacatcgatgccattcaccccggatatggattcctgtcagagcgctct
gattttgctgctgcgtgccaaaatgcgggtatcgttttcattggacctagtcccgacgtg
atggctagaatgggagataaagtcgctgctcgtcaagctgctatcgaggccggcgtacaa
gtagttccaggaactccaggaccaatcacaacagcagatgaagctgttgagtttgccaag
caatacggtacaccaatcattctgaaagccgcatacggaggaggaggacgtggaattcgt
cgtgtcgataaattggaagaagtcgaagaagcgttccgtagatccttctcggaagctcaa
gctgctttcggtgacggaagtttgttcgtggagaagttcgttgagagaccaagacacatt
gaagtccaattgcttggagatcaccacggtaacattgtccatctctatgagcgtgactgc
tccgttcaacgtcgtcatcagaaagtcgtcgaaattgctccagctccagcccttccagaa
ggtgttcgtgagaagattcttgctgatgctctccgtcttgccaaacatgttggatatcaa
aatgctggaactgttgagttccttgtcgatcaaaaaggcaactactatttcatcgaagtc
aacgctcgtcttcaagtcgagcatactgtcactgaggagatcactggtgttgacctggtt
caagctcaaattcgtattgctgaggaaaatcatacgattcacacaactggctctgctatt
cagtgcagagtaactactgaggacccagctaaaggattccaaccagattctggaagaatc
gaagtgttcagatctggagaaggaatgggaatccgtcttgattctgcatcagccttcgct
ggatccgtcatctcaccacactacgattcgttgatggtgaaagtgatcgcatcagccaga
aatcatccgaacgccgctgctaaaatgattcgtgctttgaaagagttccgtatcagagga
gtcaagaccaatattccgttcctgctcaacgttctccgtcaaccaagtttccttgatgca
tctgtagacacctatttcattgacgagcacccagagttgttccaattcaaaccaagtcaa
aatcgtgcccaaaaacttttgagttatttgggagaggtcaaagtcaacggaccaacaaca
ccacttgccacagatctgaagccagctgctgtctctcctccaatcccatacattccagca
ggtgccaaaccaccagctggtcttcgtgatgttcttgttcagaagggacctgctgaattt
gccaaggaagttcgcaaaactccaggatgcatgattactgatacaaccttcagagatgca
caccaatcccttttggccacccgcgttcgtacctacgatatggcagccatctcgccattc
gttgctcaatccttcaacggtcttttctctcttgaaaactggggtggagccacttttgac
gtctcaatgagattccttcacgaatgcccatgggaacgccttcaaactcttcgcagattg
attccaaacattccattccaatgcttattgcgtggagccaatgctatgggttattctaac
tatccagacaatgttatctacaaattctgtgacctggctgtgaagaatggtatggatgtg
ttccgtgtgttcgattcgctcaattatttgccaaatcttcttgtcggaatggaagctgtt
ggaaaagctggaggagtcgttgaagcagccattgcttacactggcgatgtcactgataaa
tctcgggataagtacgacctcaaatactacctcaacctggctgaccaactggtcaaggcg
caagctcatattctgtcgatcaaggacatggccggagttttgaaaccagaagctgccaaa
cttttgatcggagctctccgtgacaagttcccagatgttccaatccatgttcacactcac
gacacctctggagctggagtagccgccatgctcgaatgtgcgaaggctggagccgacgtt
gtggacgctgctgtcgacagcatgagtggaatgacatcgcaaccatctatgggagctatt
gtcgccagtcttcaaggaaccaaacatgatacaggtctatctcttgatgacatttccaaa
tattctgcctactgggagtcgactcgtcaattgtacgctccattcgaatgtgccacaaca
atgaagagtggaaacgcggacgtctacaagcacgagattccaggaggtcaatacacgaat
ctccaattccaagccttctcccttggattgggaccaaagttcgatgaggtcaagcgtatg
tatcgcgaagcaaacctagctcttggtgatattatcaaggtgacaccatcctcgaaaatt
gttggagatttggctcaattcatggttcaaaacaatttgactcgggaaacacttgtggat
cgtgcagatgatctctcattcccaaaaagtgttgttgatttcatgcaaggaaacgttggg
caaccaccatacggattccccgaacctctcagaaccaaagttcttcgtggaaagccaaag
gttgatggaagaccaggggagaatgccaagccagtcgacttggatgcactaaaaactgag
ctcgaggagaaacatggccgtaaattgaccgaggaagatgtgatgtcgtattcgatgttc
ccatcagtgttcgatgaattcgagactttccgacaacaatacggaccagttgacaagtta
ccaacacgattattcctgactgggcttgagattgccgaggaagttgacgttgaaatcgaa
agcggaaagaccctggctatccaacttctcgcagaaggaaagctcaataagagaggagaa
cgcgaagtgttctttgatttgaacggacaaatgagaagcatctttgtcgttgacaaagaa
gcttccaaagagattgtgacacgtccaagagctcttccaggagttcgtggccacattgga
gccccaatgcccggagacgttcttgagctgaaaatcaaggagggtgacaaggttaccaag
aagcaaccgctatttgtgctctccgccatgaaaatggagatggtaatcgactcgccaatt
gctggaacagtcaaggctatccatgctgcgcagggaacgaagtgcactgctggagacttg
gtcatcgaaattgaaccatga
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