Caenorhabditis briggsae (nematode): CBG_23329
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Entry
CBG_23329 CDS
T01054
Symbol
Cbr-osm-6
Name
(RefSeq) Protein CBR-OSM-6
KO
K19681
intraflagellar transport protein 52
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cbr03037
]
CBG_23329 (Cbr-osm-6)
Cilium and associated proteins [BR:
cbr03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
CBG_23329 (Cbr-osm-6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
OST48_N
DUF4350
Motif
Other DBs
NCBI-GeneID:
8578620
NCBI-ProteinID:
XP_002636625
WormBase:
CBG23329
UniProt:
A8Y464
A0AAE9A550
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Position
V:9091282..9093941
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AA seq
472 aa
AA seq
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MTSFTDEKMTDRSTFRKALIDQSKQQQISLISGFRGVARHLKSFLTVEINTEPINLNGLD
DVRMLIIPQPKSSFGTGEIETIWRFVKEGGSLMILSGEGGERLSLNELISKYGILVNKDS
VIRTVFLKYFDPKEALVANGVVNRSIAVAAKKNVSTEAKQNSQTLSFIYPYGCTLDVTHK
MANVVLSSGSTSFPASRPVAAFHETKLNEFKKKGRVCVVGSVSMFHDVYIDKEENGKIFD
TFVEYLVNGFDLNTIDAAEPEISDYTNIPDHIHLSQQIKVCMYEGELDSAVSSDFMKILD
NSLHSFNLNHWPMTLRLYEALNLSPPPLTLVEPQFELPMPPFQPAVFPPTFQDLPMPPLE
LFDLDEQFSSPEIQLSQLANRSDEEDLVFFIEKAGEITGINVDLMKSDRTPKKIIEVAVN
RLLLFKRSGMDAELDVGSPFAAETDHHHQENFNQTEEMDEQLFSDIEDFDDL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgacctcttttacagatgaaaagatgacagaccgaagcacattcagaaaagcgttaatt
gatcagtcaaaacagcaacaaatcagtctgattagtggttttcgaggcgttgcaagacat
ttgaaaagttttttgactgttgaaataaatactgaaccaataaatttgaacgggctagat
gatgtacgtatgcttattattcctcagccaaagtcttcatttggaacgggagaaattgag
acaatttggaggtttgtaaaggaaggtggctctttgatgatactttctggagaaggagga
gaacgtctttcactgaatgagttgatttcgaaatatggaattttagttaataaagattcg
gtgattcgaactgtatttctgaaatattttgatccaaaagaggctctcgtagccaatgga
gtggtgaataggtcgattgcggtagcagcaaagaagaatgtgagcacagaggcaaaacag
aattcacaaactctctcattcatctatccatatggttgtacactagatgtcactcataaa
atggccaacgttgttctctcttctggaagcactagttttccagcgagccgtccggttgca
gcctttcatgagacgaaactcaatgaatttaagaagaaagggcgagtttgtgtggttggt
tcggtatccatgttccatgatgtctatatcgataaagaggagaatgggaagatttttgat
acattcgttgaatatcttgtcaatggtttcgacctgaacacaattgacgcagcggaaccg
gaaattagtgattatacaaatattcctgatcatattcatctatctcaacagattaaagtt
tgcatgtatgaaggagagcttgattcagcagtgagctcggatttcatgaagattctcgac
aattctcttcactcatttaacttgaatcattggccaatgacactacgtctttacgaagct
ttgaacctatcacctcctccactaactctagtggaacctcagtttgaacttccaatgcct
ccatttcaaccagcggtatttccaccaacgttccaggatcttccaatgccacctcttgaa
ttattcgatttggatgagcaattcagttctcccgaaattcaattgtctcaacttgcaaat
cgaagtgacgaagaggatcttgtattcttcatcgaaaaagccggagagataactggaatc
aacgtggatcttatgaaaagtgacaggactccaaaaaagattatcgaggtggcagtaaac
agactgttgcttttcaaaagatctggaatggatgccgaactggatgttggatcaccattc
gctgctgaaacggatcatcatcaccaagaaaacttcaatcaaactgaagaaatggacgag
caattgttctccgatattgaagattttgatgatttgtga
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