KEGG   Caenorhabditis briggsae (nematode): CBG_23345
Entry
CBG_23345         CDS       T01054                                 
Symbol
Cbr-snr-4
Name
(RefSeq) Protein CBR-SNR-4
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CBG_23345 (Cbr-snr-4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cbr03041]
    CBG_23345 (Cbr-snr-4)
   03032 DNA replication proteins [BR:cbr03032]
    CBG_23345 (Cbr-snr-4)
Spliceosome [BR:cbr03041]
 Complex A
  U1 snRNP components
   Sm proteins
    CBG_23345 (Cbr-snr-4)
  U2 snRNP components
    CBG_23345 (Cbr-snr-4)
 Complex B
  U1 snRNP components
    CBG_23345 (Cbr-snr-4)
  U4/U6.U5 tri-snRNP components
    CBG_23345 (Cbr-snr-4)
 Complex C
  U2 snRNP components
    CBG_23345 (Cbr-snr-4)
DNA replication proteins [BR:cbr03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     CBG_23345 (Cbr-snr-4)
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 8578632
NCBI-ProteinID: XP_002636637
WormBase: CBG23345
UniProt: A0AAE9A3M4 A8Y452
LinkDB
Position
V
AA seq 118 aa
MSAQAKPRSEMTAEELAAKEEEEFSVGPLSILTNSVKNNHQVLINCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPKTGKGKKKAKSVAKDRFISKMFLRGDSVILVVKNPLAQSD
NT seq 357 nt   +upstreamnt  +downstreamnt
atgtcagctcaagcgaaaccacgttcggaaatgacagcggaagagctcgccgccaaggaa
gaagaggagttcagcgttggaccactttccatcctcaccaactcggtgaagaacaatcat
caagttctcattaactgcagaaacaacaagaagctgctcggaagagtcaaggctttcgac
agacactgcaacatggtgctcgagaacgtcaaagagatgtggacagaagtcccgaagact
ggaaagggaaagaagaaggcaaagtctgtcgccaaggaccgtttcatctcaaaaatgttc
ctccgtggagactcggtcatcctcgtcgtcaagaacccattggcacaatccgactaa

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