Caenorhabditis briggsae (nematode): CBG_23346
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Entry
CBG_23346 CDS
T01054
Symbol
Cbr-rpt-1
Name
(RefSeq) Protein CBR-RPT-1
KO
K03061
26S proteasome regulatory subunit T1
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
CBG_23346 (Cbr-rpt-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cbr03051
]
CBG_23346 (Cbr-rpt-1)
Proteasome [BR:
cbr03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
CBG_23346 (Cbr-rpt-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PRS7_OB
AAA_lid_3
AAA_22
AAA_16
AAA_5
AAA_2
Prot_ATP_ID_OB_C
DUF815
nSTAND3
RuvB_N
AAA_28
AAA_14
AAA_7
AAA_24
RNA_helicase
AAA_18
AAA_33
TIP49
Mg_chelatase
Sigma54_activ_2
AAA_3
NTPase_1
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
8578633
NCBI-ProteinID:
XP_002636638
WormBase:
CBG23346
UniProt:
A0AAE9A1C9
A8Y451
LinkDB
All DBs
Position
V:9031513..9033036
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AA seq
435 aa
AA seq
DB search
MPDHLGDDMRKTKKGETTEEEKNFQALDEGDIAVLKRYGQGPYAEQLKQLDTDIENCLKK
VNELSGVKESDTGLAPPALWDIAADKQAMQQEQPLQVARCTKIITSDKHDPRYLINVKQF
AKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVG
GCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFI
RVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRT
MLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLVGRAHILKIH
AKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAINKVVK
GYAKFSATPRYLTHN
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgccagatcaccttggagatgatatgcgtaaaacaaagaagggcgagacaaccgaagaa
gagaaaaacttccaagcactcgacgaaggagatattgctgttttgaagagatacggtcaa
ggtccatatgccgagcagctgaaacagttggatactgacattgaaaactgtttgaagaag
gtcaatgagctatccggcgtgaaagaatcggatacaggattggcaccgccagcgttatgg
gatattgctgctgacaagcaagctatgcagcaagaacaacctcttcaggtcgccagatgc
acgaaaattatcaccagtgacaagcatgatccaagatatttgatcaatgtgaaacagttc
gcaaaattcgtcgttgatcttgctgattccgttgcgccaactgatattgaggaaggaatg
agagtcggagtcgatcgcaacaagtatcaaattcatcttccacttccagcaaaaattgat
ccaaccgtaacaatgatgcaagttgaagagaagccagatgtgacatactctgacgttgga
ggttgcaaggatcaaattgaaaaacttcgtgaagtagtcgaaactccacttcttcatcca
gagcgctacgtgaatctcggaattgaaccaccaaaaggagtgctgctctacggtccccct
ggaactggtaaaactctttgcgctcgtgctgttgccaatcgtaccgatgcttgcttcatt
cgagttatcggatccgaactcgttcaaaagtacgtcggagaaggagctcgtatggttcgt
gagcttttcgaaatggctcgcaccaaaaaggcgtgtcttatcttcttcgatgaaatcgac
gctgttggaggtgctcgctttgacgacggtcagggaggagacaacgaagttcaacgtact
atgcttgaattgattaaccagcttgatggtttcgacccaagaggaaacattaaggtactg
atggcaacaaacagaccagatacacttgaccctgccctcatgagaccaggtcgcctggat
cgtaaagtcgaattcgctcttcctgatcttgtgggacgtgctcacattctcaagattcat
gctaagcagatgagtgtggaaagagacattcgctacgacttgcttgctcgtctttgccct
aacagtactggagctgaaattcgttcagtgtgcaccgaagctggaatgttcgctattcgt
gccagaagaaaggttgccaccgaaaaggatttcctcgaagctatcaataaagttgtgaag
ggatatgccaaattcagtgcaacaccgagatacctcacacataactga
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