Caenorhabditis briggsae (nematode): CBG_23399
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Entry
CBG_23399 CDS
T01054
Symbol
Cbr-elpc-3
Name
(RefSeq) Protein CBR-ELPC-3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbr03016
]
CBG_23399 (Cbr-elpc-3)
Enzymes [BR:
cbr01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
CBG_23399 (Cbr-elpc-3)
Transfer RNA biogenesis [BR:
cbr03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
CBG_23399 (Cbr-elpc-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ELP3_N
Radical_SAM_C
Radical_SAM
Acetyltransf_1
Acetyltransf_10
Acetyltransf_7
FR47
Motif
Other DBs
NCBI-GeneID:
8578680
NCBI-ProteinID:
XP_002636685
WormBase:
CBG23399
UniProt:
Q60LW7
A0AAE9F3N8
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All DBs
Position
V:8824667..8826447
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AA seq
548 aa
AA seq
DB search
MDDKGSQRALLAQTVNEIVKLLIEAHNQKKDVNLNRLKCIVAQKNGLSFQPKLVDIIAGV
PADYKDTLLPKLKAKPVRTASGIAVVAVMSKPHRCPHINFTGNICVYCPGGPDSDFEYST
QSYTGYEPTSMRAIRARYNPYLQTRGRLNQLMQLGHSVDKVEFIVMGGTFMSLPEDYRDF
FIRNLHDALSGHTSASVEEAVAYSERSKMKCIGITIETRPDYCLPRHLNDMLLYGCTRLE
IGVQSTYEDVARDTNRGHTVKSVCETFHMAKDTGYKVVIHMMPDLPNVGLERDKEQFLEL
FESPAFRPDGLKLYPTLVIRGTGLYELWKTGRYQSYPPSVLVDLIATILSLVPPWTRVYR
VQRDIPMPLVSSGVEHGNLREHAMAKMKELGLKCRDVRTREVGIQEIHNKVRPEDVELIR
RDYTANGGWETFISYEDPKQDILIGLLRLRKISDKAHRAELKGNVSVVRELHVYGSVVSV
ADRDPKKFQHQGYGSLLMEEAERIAREEHESDKIAVISGVGTRDYYRKLGYELDGPYMSK
TLDASSAA
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggacgacaaaggttcacagcgagcattgctggctcaaacggtcaatgaaatcgtcaaa
cttcttattgaagctcataaccagaaaaaagatgtgaacttgaatcggctaaaatgtatt
gttgcacagaaaaatggactcagcttccaaccaaaactggtagatatcattgctggagtt
ccagcggactacaaggatactcttctaccaaaacttaaggcaaaaccagttcgaacagct
tctggaatcgcagttgttgcagtgatgagcaaaccacatcgttgtccgcatatcaatttc
actggaaacatttgcgtttattgtccaggaggcccagattctgactttgagtactctaca
caaagttatactggttacgagccaacaagcatgagagccatccgagcaagatataatccg
tatttgcaaacacgtggaagattgaatcagttgatgcaactaggtcattctgtcgacaag
gtcgagttcatcgtgatgggaggaacattcatgtcactaccagaggattaccgagatttc
tttattcgcaatctccatgatgctctcagtggacatacttctgcttcagttgaagaagcg
gttgcctactccgagagatccaaaatgaagtgcattggaattaccattgaaaccaggcca
gactactgtctcccacgtcatctgaatgatatgcttctgtacggatgtacacgcctggaa
atcggtgttcagtcaacatatgaagacgtggcaagggatacaaatcgaggtcataccgtt
aaatcagtttgtgaaaccttccatatggcaaaagacactggatacaaagttgtaatccac
atgatgcctgatttacctaatgttggattggaaagagacaaagagcaatttttggagttg
tttgaaagtccagcattccgtccggatggcttgaaactttatccaacgttagtgattcgt
ggaacaggattgtacgagctgtggaaaactggaagatatcaaagttatccaccatcagtg
cttgttgatctaatcgcaactattctatcattggttcctccatggacgcgtgtttatcgt
gtgcaaagagacattccaatgccattggtttcatcaggtgttgaacatggaaatctccga
gagcatgcaatggcaaagatgaaggagcttggattgaaatgtcgggatgttcgaacaaga
gaagttggaattcaggaaattcacaacaaagttcgccccgaagacgtcgaattgatccga
agagattatacggctaacggtggatgggagacattcatttcgtatgaagatccaaaacaa
gatattctcattggattgcttcgattgagaaaaatctctgataaagctcatagagcagag
ttgaagggtaatgtgtctgtagtccgtgagcttcacgtatatggatcagttgtctcggta
gccgaccgggatcccaagaagttccaacaccaaggatacggatcactgttgatggaagaa
gctgaaaggatagcaagagaagaacatgaatcagataagattgcagtcatctcgggagtt
ggaacccgcgactactaccgcaagcttggttatgaattggatggtccctacatgagcaag
actcttgatgcttcgtcagccgcataa
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