Caenorhabditis briggsae (nematode): CBG_23420 Help Entry CBG_23420         CDS       T01054                                  Symbol Cbr-rad-50 Name (RefSeq) Protein CBR-RAD-50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism cbr  Caenorhabditis briggsae (nematode) Pathway cbr03440   Homologous recombination cbr03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:cbr00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     CBG_23420 (Cbr-rad-50)    03450 Non-homologous end-joining     CBG_23420 (Cbr-rad-50)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:cbr03032]     CBG_23420 (Cbr-rad-50)    03400 DNA repair and recombination proteins [BR:cbr03400]     CBG_23420 (Cbr-rad-50) DNA replication proteins [BR:cbr03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     CBG_23420 (Cbr-rad-50) DNA repair and recombination proteins [BR:cbr03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      CBG_23420 (Cbr-rad-50)     BRCA1-C complex      CBG_23420 (Cbr-rad-50)    NHEJ (non-homologous end-joining)     MRX complex      CBG_23420 (Cbr-rad-50) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_23 Rad50_zn_hook SMC_N AAA_15 SbcC_Walker_B AAA_21 AAA_29 AAA_16 AAA AAA_13 Tab2-like_N ABC_tran AAA_22 Motif Other DBs NCBI-GeneID:  8578698 NCBI-ProteinID:  XP_002636702 WormBase:  CBG23420 UniProt:  A8Y3Y7 A0AAE9F3T4 LinkDB All DBs Position V:complement(8742429..8747973) Genome browser AA seq 1354 aa AA seqDB search MKRPDRLARYEENSKRLIGMEQLEGKDVTGRRYRKEGLKLKLGRQMMNRGKPVWRLITIE RKEEELHIRGIRSVGDEDHHVQKIDFLSPCTLISGPNGTGKTTTIEALNFITTGQMPTVK KQAFIHSRDVARKTRVDASVVLEFIDVKGRVCTAVRRLVATTGTKNAAQAEEHTLAIKYP DGTTQTLSSKVCDFNKAILHHLGVPKAIFKYVIFCHQEDSTWPLSEPKELKNRFDEIFQL TKFVRAQERMRKIVGDFAKELNTHEVSKQLYESHIKEKLSARKIRDDCVKKIEKGKEATS DLKRKKTQGIKRCEELKIEIQKLDDLSISIKQNEAERGNLKKQMELIRVEPYYGTEEELR KQLEELNDGGNYADQRAKIDKRIARNNQERQELSRNKTDLENKISSLKAEAIHCEALKHD LQELESSLRAELDLEEDAALDIEVEHALNTKVKEMMKKCEIAVEDYTKLQSTHRSAQEAV TKIEVELSTMKNEKLKMEKEVDQLKSKIRQGENATSGMKELLKKEEQLRRSLDALPDVDK DALDDFKHKRDKLLKETDVLKKKCAEAEKNAENEKEKATLLQTVSIAHKKITAYKRKHEN NWKGLLGYVPEFPWSERLSTAFTKLRNDKKTMEEDFRDVQLNVQKLETMQQEYRKQEKSL TARELELSEEMSESCPYKHEDISEKLVDLRKRLKKARKDLAPISAKSDIYDSYIEESKTN GCCPLCERDFSSKKAISEFTKKLQHMTLNLPAEQEELESKVSRMEMEEVQLVKSEGQAKE LEKIVKELKEIRQKRTTNSREMEEEKESLTKNEGQLEILNKKLGFAEELQTDVGVVEQLC EQTNDNEERLANLTSEVSFSEGPSYSELRTKLEEKEKEYRRVVQESDEFQKSTEERNKLQ SKLNELGTHRVSLGEAAAQAGAFAEQLEKKKREIQKCVDEMERKRDEDLPDAKLTREELI RQLALKDEARKKAEMEMQLKRKDMQQKQEQWKMLVRNIQESNKGERMLVEQEMNVRSINE KLEENQQRQRRFEENIRSFDSVHQQELTLKDQLTRMKIEKKFREVERTLTSFVDQFNEEH LVDLKREYCQLQNDLRLIGNEEVKIFTQIQEYQKQVDAAEAKLATKDYQRAETNYRDAII EITILRESIQDLTKYRKCLDVSLIQFHTEKMAAVNVIIDELWRKVYNSTDITTIRIRSDT ASEGGSKRAYDYNVMMVQESGTEVEMRGRCSAGQKMLASLLIRIALAEVFGGLCSMIALD EPTTNLDEWKVDGMANVLSDLIEARRGYDDDGNLRGRDMQMVIITHDERLVNKITLSCRP DYIYCLGKDEHGVSFLSKRFPDGRMKRVNELHRR NT seq 4065 nt NT seq  +upstreamnt  +downstreamnt atgaaacgaccagacagattggcgagatatgaggaaaattcaaaacgactgattggcatg gaacagctggaaggaaaagacgtcacaggaagaagatacagaaaagaagggttgaagttg aagcttggaagacagatgatgaatcgagggaaacctgtttggcggttgattacgatcgaa cggaaggaggaggaacttcacattcgaggcattcgaagtgtcggtgatgaagatcatcat gttcaaaagattgattttctttcgccttgcacactgatcagtggacctaatggaactggc aagaccaccaccatcgaagcgctgaacttcatcacaactggtcagatgccgacagtgaaa aaacaggctttcattcacagcagagatgttgctcgaaagacccgcgtagatgcatcagtt gttttggagtttattgatgtgaaaggaagagtgtgtactgctgttcggagattggtcgct accactggaaccaagaatgccgctcaggctgaggagcacactctagcgatcaaatatcct gatggcactacacaaactttgagtagcaaagtttgcgacttcaacaaagccatcctacat catctaggcgttccaaaagctattttcaaatacgtcatcttttgtcatcaggaagattcg acatggcctctgagcgagccgaaagagctcaaaaatcgtttcgatgagattttccaattg acaaaatttgtgagagctcaggagagaatgagaaaaatcgttggagacttcgcgaaggag ctgaacactcatgaggtgtcaaaacagctctacgaatctcatatcaaagagaaactgagc gctcgtaagattcgtgacgattgtgttaagaaaatagaaaaagggaaagaagctacgagc gatttgaagcgaaagaaaactcagggtatcaaaagatgcgaagaactgaaaatagaaatt caaaagttagacgacctgagcatctctatcaaacagaatgaggctgaacgcggaaacctg aagaaacaaatggagttgattcgtgttgaaccatattatggaaccgaagaagaattgaga aagcagttggaggagttgaatgatggagggaactatgcggatcaacgtgctaaaatcgac aagagaattgcgagaaacaatcaggaaagacaagaattgtccagaaataaaacggatctg gagaataaaatatccagtttgaaagccgaagcaatacattgcgaggctttgaaacatgat ctgcaagagctggaatcatctcttcgggctgagcttgatcttgaggaggatgctgctctt gatatcgaagtcgagcacgctttgaacacaaaggtgaaagaaatgatgaagaagtgtgag attgcggttgaagactacacaaaactccaatcaactcatcgatctgctcaggaagctgtc acaaaaattgaagttgagctgagcacaatgaaaaacgaaaaattgaaaatggaaaaagaa gtcgatcagctaaaatcgaagattagacaaggagaaaacgcaacatctggaatgaaagag cttctcaaaaaagaagagcaacttcgtaggagcttggatgcgcttccggacgttgataaa gatgcactcgacgattttaaacataaaagagacaaacttctgaaagaaacggatgtgctt aagaaaaagtgtgctgaagcggagaagaacgccgagaacgagaaagaaaaagcaaccctt ctacagaccgtgtctattgctcataaaaagatcactgcatacaaacgtaagcatgagaac aactggaaaggacttcttggatatgttccggaattcccttggagtgaacggttatcgaca gcattcaccaagctacgaaatgataagaaaacgatggaagaagattttcgggatgtgcag ttgaacgtgcaaaagctggaaacgatgcagcaagagtacagaaagcaagaaaagagtttg actgcccgggaactcgaattgagcgaagagatgtctgaatcatgcccgtataagcacgaa gatatttccgagaaactggtggatttgcgtaagcggctgaaaaaagctcgaaaggatctg gcgccaataagtgcaaagtctgatatctacgattcgtacatcgaggagtcgaaaaccaac ggatgttgtccattgtgtgaacgtgatttttcttcgaaaaaggccatttctgaattcacg aaaaaactccaacatatgactctgaacttacccgccgagcaagaagaactcgagtctaaa gtgtcccgaatggaaatggaagaggttcaactggtgaaatctgaaggacaagcaaaagag ttggaaaagattgtaaaagaattgaaagaaattcgtcagaagaggacaaccaattctcgc gaaatggaagaagaaaaagaaagcttgactaaaaatgaaggacaacttgagattctgaat aagaaattaggttttgctgaagagctacaaaccgatgtgggagttgttgaacaactctgc gaacaaactaacgataatgaagaacgtcttgcgaatttaacctcggaagtcagcttcagt gaaggtccgagttacagcgagcttcgtactaaactggaagagaaagagaaagaatatcgc cgagttgttcaagaaagcgacgagttccagaagtccaccgaagaaaggaacaaacttcaa tcaaagctaaatgaacttggaacccatcgtgtctctttgggagaagctgctgcccaagca ggagcgttcgctgaacaacttgaaaagaagaagcgtgaaattcagaagtgtgttgatgag atggagagaaaaagagatgaagatctgccagatgcgaagttgactagagaggaattgatt cgacagctggctttgaaagatgaggctcggaaaaaggctgaaatggaaatgcaactgaaa aggaaagatatgcagcagaagcaagaacaatggaagatgttggtgaggaacattcaagag agtaataagggtgagagaatgctggtcgagcaggagatgaatgtgagatctatcaatgaa aaactggaagaaaaccaacaacgccagagacgtttcgaggaaaatattcgttcattcgac agcgtccatcaacaggaattgactctcaaagatcaactcacccgaatgaagattgagaaa aagtttagagaagtggaacgcacattgacgtcatttgtcgatcagttcaacgaagaacat ttggtagacttgaaacgagagtactgtcagttacaaaacgatttgagactgattggaaac gaagaagtgaaaattttcacccaaatacaagaatatcaaaagcaggttgatgcggcagag gcgaaattggctacgaaggattaccaacgagctgagacgaattatcgagatgccatcatc gaaattacgattcttcgtgaatcgattcaggatttgacaaagtatcgaaagtgtcttgat gtgtccctcattcaattccatactgaaaagatggcagcagtgaatgttatcattgacgaa ttgtggagaaaagtctacaattccacagacatcactaccattagaatcagatccgatact gcatctgagggcggaagtaagagagcatatgactacaatgttatgatggtccaggagagt ggtactgaagtagagatgcgtggaagatgtagtgctggacagaagatgctcgcttctctt cttattcgcattgcccttgccgaagtttttggtggattgtgttccatgattgcgttggat gagccaaccacaaacttggatgagtggaaggttgatggaatggcaaacgttcttagtgat ctgattgaagcacgacggggttatgacgacgatggaaatttgagagggcgtgatatgcag atggtcatcatcacacacgacgagcgtctcgtcaacaaaatcactctcagctgccgtcca gattatatctactgtttggggaaggatgagcatggagtcagtttcttgtcgaaacgattc ccagacggaagaatgaaacgagtcaacgagttgcacagacgctag

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