Caenorhabditis briggsae (nematode): CBG_23703
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Entry
CBG_23703 CDS
T01054
Name
(RefSeq) Protein CBG23703
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CBG_23703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbr03021
]
CBG_23703
Transcription machinery [BR:
cbr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
CBG_23703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta_N
TFIIF_beta
LAP1_N
Motif
Other DBs
NCBI-GeneID:
8580646
NCBI-ProteinID:
XP_045091143
WormBase:
CBG23703
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All DBs
Position
V:19473895..19475958
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AA seq
236 aa
AA seq
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MSSTSTPAPPKKQRYDNEVECELAKRGCWLVKVPRYLSELWEANEGAVVGKLHIGPEIEF
QTSQGLRQPPPKDEGEGTSSTTTNTAVTSSRVSEIPTQYTFILHDVKGSTMSVLSEDKQA
LGAEATVKTGKLAIEGRIMKRAECRPPATSKYMKMKLAHIVKNTQPKKTVKMIDKAAVKF
KPVAVHAEDMIKNKQKKDGAKTYRADRDVLRGALFKAFEKHSYYRFEMIYPEVWKI
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgacatcaaccccagcgccgcctaaaaagcagcgatatgataacgaggtggag
tgtgagctggcgaaacgcggatgttggctcgtcaaagttcccagatacctctcggagctc
tgggaggcaaatgagggagcagtggttgggaaattgcacattggaccggagatcgaattc
caaacaagccaaggtctgcgtcaaccaccaccaaaagacgagggagagggaacgtcatct
accaccaccaacaccgcggtcacgtcttctagagtctctgaaatacccacacagtacaca
ttcatccttcacgacgtcaaaggatccacaatgagtgttttgagtgaggataagcaggct
ttgggagccgaagcaactgtaaagaccggcaaattggctatcgagggaagaatcatgaaa
cgagccgagtgtcggccgccggcgacgtcgaaatatatgaagatgaagttggcgcatatt
gtgaagaatacacagccaaagaagactgttaaaatgattgataaggcggcggtgaagttc
aaaccagtggctgtgcatgctgaggatatgattaagaacaagcagaagaaggatggtgcg
aaaacgtacagagccgatcgagatgtgctcagaggagcgctgttcaaggcgttcgagaag
cacagctattatagatttgaaatgatatatccagaagtttggaaaatttga
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