Caenorhabditis briggsae (nematode): CBG_23733 Help Entry CBG_23733         CDS       T01054                                  Symbol Cbr-taf-5 Name (RefSeq) Protein CBR-TAF-5   KO K03130   transcription initiation factor TFIID subunit 5 Organism cbr  Caenorhabditis briggsae (nematode) Pathway cbr03022   Basal transcription factors Brite KEGG Orthology (KO) [BR:cbr00001]  09120 Genetic Information Processing   09121 Transcription    03022 Basal transcription factors     CBG_23733 (Cbr-taf-5)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cbr03021]     CBG_23733 (Cbr-taf-5)    03036 Chromosome and associated proteins [BR:cbr03036]     CBG_23733 (Cbr-taf-5) Transcription machinery [BR:cbr03021]  Eukaryotic type   RNA polymerase II system    Basal transcription factors     TFIID      CBG_23733 (Cbr-taf-5)    Coactivators     SAGA/TFTC/STAGA complex      CBG_23733 (Cbr-taf-5) Chromosome and associated proteins [BR:cbr03036]  Eukaryotic type   Histone modification proteins    HAT complexes     PCAF complex      CBG_23733 (Cbr-taf-5)     STAGA complex      CBG_23733 (Cbr-taf-5)     TFTC complex      CBG_23733 (Cbr-taf-5)     SAGA complex      CBG_23733 (Cbr-taf-5)     SLIK complex      CBG_23733 (Cbr-taf-5) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR90_POC16_2nd TFIID_NTD2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_IFT140_1st WDR55 Beta-prop_WDR75_1st WDR90_beta-prop_4th KNTC1_N Beta-prop_IFT122_1st WD40_like WD40_RFWD3 LisH Beta-prop_EIPR1 Beta-prop_HPS5 RMC1_N Beta-prop_SCAP VPS8_N Motif Other DBs NCBI-GeneID:  8588102 NCBI-ProteinID:  XP_002646170 WormBase:  CBG23733 UniProt:  A0AAE9DUR8 A8WJ61 LinkDB All DBs Position I:5863904..5867657 Genome browser AA seq 646 aa AA seqDB search MNLNDNENSNSQFFDSPPMNSMNNNHPGEDFFSKPMTNDSLQAVLEYLRKNGLTETEEQL TREAGPILRNEGTSGLPPEEAISVEFDTFVKHANDCSDVIQAEFSQLLFPIFAHSYIALI EKHAPTARVFFNRFKVFIPECFSEFVYRLSLIEDAMTLRPNEYVRTLRDNKFVVKLSKPT MKHLELIQTRLIGVKNIIAKHISIENADDGAVSRTMIETQMGGILGVISKGERRHKMLFS VVKDELMQSIEKRKSKGKDVGKKMQTSQHCPAHDRVPLPPLSEHLREERRNWLRDVGKMA IISPETPVSICMYTTINAPIGVASCDFSDDSSFIVMGLSDSSIVINAMDPMNKMKKLRDM EYLEKIDIETADNVQSQMYDLQASTSSARLTGHGGPVFSVNFSPDRRLLLSSSGDKTVRL WSMDAQRNVVIFRLPSMVWQAQFCSRGYYFATASADKTVSMWSTDRMTPLRMFPDAYGDV GCIDYHPNCNYIAGGSEDRYVRVWDVVSGVRVRLFSGHKAPIIALKFSPCGRYLVSLDAI GTIMVWDLAYQRLVAAEITEQAGAKGHISFTRDGGVFAVSHGNDNIQLYSLDALISAAAT QNDLYAEPRVNMEGFQLGSYATKQTAVIGLHFTRRNLLLGFGCFGQ NT seq 1941 nt NT seq  +upstreamnt  +downstreamnt atgaacttgaacgacaacgaaaactcgaatagtcaatttttcgattcgccaccaatgaat tcgatgaacaacaatcatccgggagaagatttcttctcaaaaccaatgacgaatgactcg ttgcaagcggttctcgagtatttacggaaaaatggtttaacagaaactgaagagcaattg acgagagaagcaggacccattctacgaaacgagggaaccagtggattgccaccagaagaa gctatttctgtggaatttgatacatttgtcaaacacgccaacgactgttccgacgtcatc caagcagaattcagtcaacttctgttcccaatattcgcacacagctacattgccttaatc gagaagcacgccccaactgctcgtgttttcttcaatcgattcaaagttttcattccggaa tgtttttccgaattcgtctacagactgtcacttatcgaagatgcgatgacactgcggcct aacgaatacgtcagaactctccgggataacaaattcgttgtgaagctatcgaaaccaacg atgaaacatttggaactgatccaaactagactaattggagtcaaaaatataattgccaag cacatcagtattgagaatgcggacgatggtgcagtgagtcgaactatgatcgagacgcaa atgggaggaattttgggagttataagtaaaggagaaagaagacacaagatgttattctcg gtggttaaggatgaattgatgcaaagtattgagaagaggaagtccaaaggaaaagatgtg ggaaagaaaatgcaaacttctcaacattgtccagcacacgatcgtgtccccctcccacct cttagcgagcatctccgagaggaacgacgaaattggctccgtgacgttggaaaaatggct ataatttctccagaaaccccagtttctatttgcatgtacactacgattaatgctcccatt ggagtcgcttcttgcgatttctccgatgactccagcttcattgtcatgggactttcggat tcttccattgtcatcaatgcgatggacccaatgaacaaaatgaagaagttgagagatatg gagtacttggagaaaattgatatcgagacggcagacaatgtgcaatcacagatgtatgac ctacaagcatcgacgtcgagtgcaaggttgactggtcatggaggtccagtgttttctgtg aacttttcaccggatcggcgtcttctactttcttcatctggagacaaaaccgtccgattg tggagtatggatgctcagagaaatgttgtgatcttcagattaccatcaatggtctggcaa gcgcaattctgttctcggggttactattttgccactgccagtgccgataaaaccgtttca atgtggagtactgatcgaatgacgcctcttcgaatgttccctgacgcgtatggagatgtt ggatgcattgactatcatccgaactgtaactacattgccggaggatcggaagatcggtac gttcgagtttgggatgtggtatctggagttcgcgttcgcctgttcagtggtcataaagcg cccataatcgctctcaaattctccccatgtggtcgttatctcgtttcactggatgccatc ggaactattatggtctgggatttggcttatcaacgattggtggcagcggaaattacagag caagctggagccaagggtcacatctcattcactcgtgacggaggagtcttcgcagtgtca catggaaacgacaacattcagttatattctctggatgcattgattagtgctgcagccacc cagaatgatctttatgctgagccaagagtgaacatggaaggattccaactgggatcgtat gcaacaaaacagactgctgtcattggtcttcatttcactcgtcggaatcttcttcttggt tttggttgtttcggacaataa

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