Caenorhabditis briggsae (nematode): CBG_24496
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Entry
CBG_24496 CDS
T01054
Symbol
Cbr-stn-1
Name
(RefSeq) Protein CBR-STN-1
KO
K24064
beta-syntrophin
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
CBG_24496 (Cbr-stn-1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PDZ
PH
PH_17
PDZ_6
PDZ_2
DUF3123
PA14
Motif
Other DBs
NCBI-GeneID:
8588060
NCBI-ProteinID:
XP_002646191
WormBase:
CBG24496
UniProt:
A0AAE9DUN0
A8WKU4
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Position
I:complement(5810300..5812387)
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AA seq
422 aa
AA seq
DB search
MAAVRSGLVDIFVQGQWHRVLATLDPTAITLQTMEQNEVEAEKRTVRVVKYDGNGLGISI
KGGRDNNMPIVISKIFKGMAADQTGELFLDDVIISVNGESLLDASHEEAVRALKRAGRVV
DLQVQYRREDMMHRENIVENVEWDDDIRERVRTIGLKLAYVARAGIDADAEGRILEMRSP
SGRYSLAMRCSSSEEADGWFEALHACTTCLLTQALAQVNIMLGNNPQVRHMGWIAEQVSE
NGISMWKPKFMTLTNSEILFYEAVPQLKAEWAEPRLVRPLVATRVVQTSSRSAPVIKGLT
DVISFRMRTGTQQGVRTHTIRVETHAELARWVRAVVIGGYEACLATSQVSAPCLWRGESC
ELIVNLDNGISLLSSSGEVLWQHSFETIRATGDDGGRFLWVDFGPPHGEQVISFLIFKGK
QW
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgttcgatccggccttgtcgacatttttgtgcaaggacaatggcatcgtgtt
ctggcaacactcgatccaactgcaatcacattgcagacaatggaacaaaatgaagtggaa
gcggagaagagaacggttcgagtcgtgaaatatgatggaaatgggttgggaatttcaatt
aaaggcggacgagataacaacatgccaatagtaatcagcaaaattttcaaaggaatggca
gcggatcaaactggagaactgtttttggacgatgttataatttcagtcaacggagagagc
ctactagatgcatcacatgaagaagcagtcagagctttgaaacgagcaggacgtgtggtt
gatctccaagtacagtatcgaagagaggatatgatgcatcgagagaatatagttgaaaac
gtggaatgggatgatgatatccgagaaagagttcgaacgataggtcttaaactggcgtat
gtagcaagagctggaatcgatgccgatgctgaaggaagaattttggaaatgagaagtcca
tcaggaagatactctttagcgatgagatgctctagtagtgaagaagctgatggatggttc
gaagctcttcacgcatgtacgacatgtcttctgacacaagctctggctcaagtgaacatt
atgctcggaaacaatccacaagtgaggcacatgggttggatcgcagagcaagtatcagaa
aatggaatttcaatgtggaaacccaaatttatgacactaaccaacagcgagattctgttt
tatgaagccgttccacaattgaaagcggaatgggcagagcctcgattagttaggcctctc
gtagccacgagagtagtacagaccagttctcgaagtgccccagttatcaaaggtctcaca
gatgtgatctcattcaggatgagaacgggaactcaacaaggagtcagaacccatacgatt
cgtgttgaaacccatgctgaattagcgagatgggttcgagcagtagttattggaggatat
gaagcttgccttgcaacttcacaagtttctgcaccgtgcctatggagaggagaatcatgt
gaactaattgttaacttggataatggtatatcacttttatcatcttctggagaggtactg
tggcaacattcgtttgaaacgattcgtgccactggcgacgatgggggtcgctttctctgg
gttgattttggaccaccacatggtgaacaggtaatttcatttttaattttcaaaggaaaa
caatggtaa
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