Caenorhabditis briggsae (nematode): CBG_24520
Help
Entry
CBG_24520 CDS
T01054
Symbol
Cbr-fars-2
Name
(RefSeq) Protein CBR-FARS-2
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CBG_24520 (Cbr-fars-2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cbr01007
]
CBG_24520 (Cbr-fars-2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbr03016
]
CBG_24520 (Cbr-fars-2)
Enzymes [BR:
cbr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
CBG_24520 (Cbr-fars-2)
Amino acid related enzymes [BR:
cbr01007
]
Aminoacyl-tRNA synthetase
Class II (U)
CBG_24520 (Cbr-fars-2)
Transfer RNA biogenesis [BR:
cbr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CBG_24520 (Cbr-fars-2)
Prokaryotic type
CBG_24520 (Cbr-fars-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
FDX-ACB
tRNA-synt_2
Cytochrome-c551
Motif
Other DBs
NCBI-GeneID:
8590336
NCBI-ProteinID:
XP_045091358
WormBase:
CBG24520
LinkDB
All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
MLQTGRRCFSVLARCQPIATSSARAYSTEKAQKMEKKEIFELDGRQYTPDALYNLSPAVR
RLLDRRILQETSNPLNLLKRRVVDYVHQTYRKPGNRSPLFTICESEPRVVTTYQNFDSLL
TPEDHVSRRPSDTYYVNREHCLRAHTSAHQHTLMKQGLDVFLVIGDVYRRDEVDRTHYPC
FHQIEGVRLYTRDELLGKKSDASENAAELFTVTRDASRIPEKQETHSLDAVKAAEIQLKQ
FLESLCDELFGRDADKRWVDAYFPFTHPSWELEVFYNGQWLEVLGCGIMEQKLLESAGVT
DKIGWAFGIGLERIAMVLYGIPDIRLFWSKDTGFLSQFAGKQPGEDVKYKQISAHPQVIF
DISFFLPDSTEFNDMTSDVYDTIRTIGGELVEQVKLTDEFENKKKAKKSQTYRIVYRSHE
KALTKEEVNVIHKQIEQSLSTTYGVVLR
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgctccaaacgggtcgacgatgcttctcagtcttggcacggtgccaacccattgcaacg
tcatcagcgagagcctatagtactgaaaaagctcagaaaatggagaaaaaggagattttc
gagctagacggacgtcaatacactccagacgccctctacaacctctcgccagccgttcga
cgtcttctggatcgacgaatcctacaggagacgtcaaatccgttgaatttgctgaagaga
cgagtcgtggactatgttcatcagacttataggaaaccaggaaatcgctctccgctgttc
acaatttgcgaatcggaaccccgcgtcgtcaccacctatcagaatttcgactcgctgctc
acaccagaagatcatgtgtctagacgcccctccgacacgtactacgtcaaccgagagcac
tgtctgcgtgctcacacctcggctcatcagcacacactgatgaaacagggtctggatgtg
tttctagtgattggagacgtttatcgacgggatgaggtcgatcggacgcactatccctgt
tttcatcagatcgaaggcgtccgcctctatacccgcgacgagcttctcggcaaaaaatcg
gatgcctcggaaaacgcggccgaactatttacagtaacccgagacgcctccagaattcca
gaaaaacaagaaacgcactcgttggatgcggtaaaagccgctgaaattcagctgaaacaa
tttttggagagcctttgcgacgaattattcggcagagacgccgacaaacgatgggtcgat
gcgtatttcccgtttacgcatccgtcctgggagttggaggtattctacaatggccagtgg
ttggaagtgctcggctgcggaatcatggagcagaagcttctggaatccgccggtgtcacc
gacaaaatcggatgggcatttggtatcggtctggagaggattgcgatggttttgtatgga
attccggatattagattattctggtccaaagacactggattcttgtcgcaattcgctgga
aaacagccgggcgaggatgtgaaatacaagcagattagtgcgcatccacaggtaattttc
gacatttcgttcttcctaccggactccacagagttcaatgatatgacatctgacgtttat
gatacgattcgaacgattggaggggaattagtggaacaagtcaagctaaccgacgaattt
gagaacaaaaagaaggccaagaagagccagacctaccgtatcgtctaccgtagtcatgag
aaggcgttgacgaaagaggaggtcaacgtgatccacaagcaaatcgaacagtccctatca
acgacgtatggagtcgttttgcgatga
DBGET
integrated database retrieval system
