KEGG   Caenorhabditis briggsae (nematode): CBG_24566
Entry
CBG_24566         CDS       T01054                                 
Symbol
Cbr-eft-3.2
Name
(RefSeq) Protein CBR-EFT-3.2
  KO
K03231  elongation factor 1-alpha
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CBG_24566 (Cbr-eft-3.2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbr03019]
    CBG_24566 (Cbr-eft-3.2)
   03016 Transfer RNA biogenesis [BR:cbr03016]
    CBG_24566 (Cbr-eft-3.2)
   03012 Translation factors [BR:cbr03012]
    CBG_24566 (Cbr-eft-3.2)
   04131 Membrane trafficking [BR:cbr04131]
    CBG_24566 (Cbr-eft-3.2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cbr04147]
    CBG_24566 (Cbr-eft-3.2)
Messenger RNA biogenesis [BR:cbr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     CBG_24566 (Cbr-eft-3.2)
Transfer RNA biogenesis [BR:cbr03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    CBG_24566 (Cbr-eft-3.2)
Translation factors [BR:cbr03012]
 Eukaryotic type
  Elongation factors
   CBG_24566 (Cbr-eft-3.2)
Membrane trafficking [BR:cbr04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    CBG_24566 (Cbr-eft-3.2)
Exosome [BR:cbr04147]
 Exosomal proteins
  Proteins found in most exosomes
   CBG_24566 (Cbr-eft-3.2)
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 WH_Rok DUF34_NIF3 DUF5036
Other DBs
NCBI-GeneID: 8590363
NCBI-ProteinID: XP_045091367
WormBase: CBG24566
LinkDB
Position
Unknown
AA seq 472 aa
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT
GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK
IGYNPKAVAFVPISGFNGDNMLEASANMPWFKGWAVERKEGNASGKTLLEALDAIIPPQR
PTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLP
EAVPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQIAAGYTPV
LDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAP
LGRFAVHKPSLSESSSQSRSPMDPPERSPSPPRRLPQRRSKSSLLSLSLIFE
NT seq 1419 nt   +upstreamnt  +downstreamnt
atgggaaaagaaaaggttcatatcaacatcgtcgtcatcggacacgtcgactccggaaag
tccaccaccaccggacacttgatctacaagtgcggaggaattgacaagagaaccatcgag
aaattcgagaaggaggctcaggagatgggtaagggatctttcaagtacgcttgggtcctc
gacaagctgaaggccgagcgtgaacgtggtatcaccatcgatatcgctctctggaagttc
gagaccgctaagtactacatcaccatcatcgatgccccaggacatcgtgatttcatcaag
aacatgatcaccggaacctcccaggctgattgcgccgttttggtcgtcgcttgcggaacc
ggagagttcgaggctggaatctccaagaacggacaaacccgtgagcacgctcttcttgcc
cagacccttggagtcaagcagctcatcgtcgcctgcaacaagatggactccaccgagcca
ccattctctgaggctcgcttcactgagatcaccaacgaggtctctggattcatcaagaag
atcggatacaatccaaaggctgttgccttcgtcccaatctccggattcaacggagacaac
atgctggaggcttccgctaacatgccatggttcaagggatgggctgttgagcgcaaggaa
ggaaatgcttccggaaagaccctcctcgaggctcttgacgccatcattccaccacaacgc
ccaactgaccgaccactccgtctccctctccaggacgtgtacaagatcggaggaatcgga
actgtcccagtcggacgtgtcgagaccggaatcatcaagccaggaatggttgttaccttc
gctccacagaacgtgaccactgaagtcaagtccgtcgagatgcaccacgagtctctccca
gaggccgttccaggagacaacgttggattcaacgttaagaacgtctccgtcaaggacatc
cgtcgtggatccgtctgctccgactccaagcaagacccggccaaggaggctcgtaccttc
cacgcccaggtcatcatcatgaaccacccgggacaaatcgccgctggatacaccccagtt
ctcgattgccacaccgcccacattgcttgcaagtttaacgagcttaaggagaaggtggac
cgtcgtaccggtaagaaggtcgaggacttcccaaaattcctcaagtccggagatgctgga
atcgtcgagctcatcccaaccaagccactttgcgttgaatccttcacagactatgcccca
ctcggacgtttcgccgttcacaaaccgtcgctgtcggagtcatcaagtcagtcgagaagt
ccgatggatcctccggaaaggtcaccaagtccgcccagaaggctgccccaaagaagaagt
aaatcttcattgttgagtttatcgttgatttttgaataa

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