Caenorhabditis briggsae (nematode): CBG_25451
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Entry
CBG_25451 CDS
T01054
Name
(RefSeq) Protein CBG25451
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbr03000
]
CBG_25451
Transcription factors [BR:
cbr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
CBG_25451
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
68916940
NCBI-ProteinID:
XP_045097975
WormBase:
CBG25451
UniProt:
B6IES2
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Position
II:complement(292682..294855)
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AA seq
478 aa
AA seq
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MDVKMSETPGSLNESPKSSVLKGIPLQAASFQIWAEKHKKEKDRNKSQLDLFKIYGPIWE
KLSRQEKKPFEDEVNKLYSKKAGFQKPEKARKVNQKLKYPPNSLGLWLEEVRTSDDVGKS
VVDLSRKYGEAWRNLSEEERKPLIEKARKLREIFKKEHPLAYTRKKDEEKVIRFKEETVG
EVLKKQVFQYKEPEAEKLNQELSSFFEITKNLGVDFKTDSVADSSEAQQNCKIEKSRHPI
DIPILKDTENNNKNQSGFQNLSQNPLQNSSVFQHNSIDLVIEDVLRNVKSGSLDYRVWKK
SIYEKEYEKFPEIFEESGNLIDLEILKSPSVEYCPAPSETLSTFKNKTKKATKNRKSENS
QKVIQILQHCSSEDFKEKSIESVIEDVLRNVKSGSLDYEISKESVYEKDYEKLPEIFEEN
FGSEPSKAKTKKVRKIVKCENPNDILPFPEVDQLDVQFDIDSIHPTFFGPNGYKWEHF
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaaaatgtctgaaaccccgggtagtctgaatgaatcgccaaaatcttcggtt
ttaaagggaatcccacttcaagcagcttcatttcaaatttgggcagagaaacacaagaaa
gaaaaggacaggaacaaaagccaactggatcttttcaaaatttatggaccaatttgggag
aaattatcaagacaggagaagaaaccgtttgaagacgaggtgaataagttgtattcgaaa
aaagcagggttccagaaaccggaaaaagctcgaaaagtgaatcaaaaactcaaatatccg
ccaaattcgctgggattatggttggaagaagttcggacaagtgatgatgttgggaagagt
gtcgtggacctgagcagaaagtatggagaagcttggagaaatttgtcagaggaggaaagg
aaaccgttgattgagaaagcaagaaagttgagagagatttttaaaaaggaacacccactc
gcttacacacggaaaaaggatgaggagaaagtcattcgatttaaagaggaaactgtggga
gaagtgttaaagaagcaagtcttccaatacaaagaaccagaagctgaaaaattgaatcaa
gaattgagctcattttttgagatcacaaaaaacttgggagtggattttaagacggattcg
gtggctgattcatctgaagcccaacaaaattgcaaaatcgaaaaatctcgacacccaatt
gatattccaattctgaaggataccgaaaacaacaacaaaaatcaaagtggtttccagaat
ttgtcacagaatccgttacaaaattcctcggtttttcaacacaattcgattgacttggtg
attgaggatgttttaagaaatgtgaaatctggaagtctcgattacagagtttggaaaaaa
tcgatttatgaaaaggagtatgaaaagtttccagagatttttgaggaatctggaaacttg
attgatttagaaattttaaagtctccatcagttgagtattgcccagcaccttctgaaacc
ctctcaacgttcaaaaacaagacgaaaaaggctacgaaaaatagaaaatctgaaaacagt
cagaaagttatccagattttacaacattgttcgtcagaggatttcaaggaaaagtcaata
gaatcggtgattgaagacgttttgagaaatgtgaaatctggaagtttggattacgaaatt
tcaaaagaatcggtttatgaaaaggattacgaaaagcttccagagatttttgaggagaat
tttggctctgaaccttccaaagcaaagaccaaaaaagttcggaaaattgtgaaatgtgaa
aatccaaatgatattttaccgtttcctgaagtggaccaattagatgtacagtttgatatt
gatagcattcatccaacatttttcggaccgaatggctataaatgggagcatttttga
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