Caenorhabditis briggsae (nematode): CBG_25999
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Entry
CBG_25999 CDS
T01054
Name
(RefSeq) Protein CBG25999
KO
K06677
condensin complex subunit 1
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cbr03036
]
CBG_25999
Chromosome and associated proteins [BR:
cbr03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
CBG_25999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cnd1
HEAT
PDS5
SCD
Cnd1_N
HEAT_2
Cohesin_HEAT
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
68917481
NCBI-ProteinID:
XP_045100088
WormBase:
CBG25999
LinkDB
All DBs
Position
III:5237693..5243223
Genome browser
AA seq
1510 aa
AA seq
DB search
MPPKKHKKPVDAPPSPSQVDIADLQSSKFKLIAELIAETDQNLPDDEIDQAIEEFASSGD
HSEWQGIEKAFPYLCSMARRSSTYGNWRKRFQVVDYLLSCFQELYTDVSSNVENYFDQKT
DSEPDVEIIHAVSMFVILASKLIVQLQLHVSKVTAESNQGKRGGGRRDLDEETAEYCARW
KNYQRNRIIGCLIQLLELRVDTAGGLKKKAIQYIFAPDAMEKDFIARFMDTVSQLLEDPE
NAARSSQAWIVSYFEIWKVLATEYQMAPCMTLAKPSEKINLITDIANSIFGDTLDLPYLE
TASSFPFIEPIVRMMKDNSAPGRNRINQPLRALLEMCVRRACSVYSGDRAEHPPPKAFCM
IIQALALHCPDVMLQEVNNVVRLLENPHVNVRMATLQALADMFASPYLSKELCEEFKTRI
DKRKIIFTRLCAHVIDEGTNVRTKSISLLRSLMENRRIPEEFESLGFLTLVAGRLNDKSV
QVRKAAIQFLTSFLDNNRHGHDFSKAVHVNLMQEKRLELLRLNTPKSRAIQQAEDEYMAR
DFRLKTDIRHELTGIFKGEVSISREDDIMWVFEDKRSNQFRSYFRPLAILLTDLDRPGVG
AGLARFYASQENFPCNATRRNDLPDHGLELLDEAVRHVHESGKLDYQQFKLQILRNNDDQ
LLEDEQEARDHKHKVQQLRAQMQQLINKMLIGLELEKALTIALRCVLMGETAEIKEGIKF
LTRCKLFGIAGADDAMRSMCSLVWRPHADVLNELIEAAEDMFISKLEGGEKAAERDKSTV
ENLMSAMDGVAKGDQASVEEVVYLLASKELPSTLGEKNNKAPRKRRPMETSVIIKLWHIA
LDTSIGNDNRKLVALKILFPISRTEKGLPEARSRLRSLQRKLDGDPKIAVAALRIISILG
GQTEQEKEADAFKRPIFRIHQDDSLFKSIENFFFRVKILCFVEVVKADDSPDRDWFGVVR
YTVHILLNISMDANIMLPRLASHFLYRAKRISEFFIFYSKQAEGPVVDPVRTEAAIRRRD
YWGLTWCRVMEKLMAFIGEVASQVHAYTQITIPRLHTRYISKMRDAEKSDSKLREESVRF
LTDLEKSIAQKKTIFALPPQDNTQAATTDHYFFVKLLCDKRLFIPSKLLGRLLPIVVYGM
RVKTMPTRIKQAATIAFAKFMPLSSEIASFGAPSFFGSMVNSNHSLIRCNMIASCCDFAF
AQPTIFELYAPNLFKMSQDKSADARESALLVLTHLMSNDMIQTRGVLSESARCICDTARP
VREAAQSLFRDLNARSETVVQLLPEFLYRLSVTSERLSMKQYKTVFEFLIALLKEKSRTT
DLMIDRVCLKFSNIDMNDTEAPKYLLIALAKFAQNEGGLARLHDNWRHWSKFLCHSQVAR
EYVQMIEHMQSVSKNEDYKSQCSELIASIKKVNEEGLRKEDITAAPQAAKKKGRGRKAAA
AGADTPSTSAARTPRRKRGPTPSYEESEYGEQMEEDEREEEEEEVEEVYEEAEMEEVPEE
EEDPEYDFEQ
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atgccaccgaaaaagcataaaaagccagtggacgctccaccgtccccatcgcaagtagat
attgcagatttacagtcgagcaagttcaagcttattgcggagcttatcgccgaaactgat
cagaatcttcctgatgacgaaatcgatcaagctattgaagaattcgcgagttctggagac
cattccgaatggcaaggaatcgagaaagcgtttccttatctttgttccatggctcgacga
tcatcgacttacggaaattggaggaagcgattccaagttgtcgactatcttctttcatgt
ttccaagaattgtatactgatgtgtccagtaatgtcgagaactacttcgatcaaaaaacg
gattcagaaccggacgttgaaatcatccatgctgtcagcatgtttgtgattctagcttcg
aaactcatcgttcaactccaattgcatgtgtcgaaagtaaccgctgaaagtaatcaaggc
aaacgaggaggtggtagaagagacctagatgaagaaactgccgagtactgtgctcgctgg
aagaactaccagagaaaccggattatcggctgcctcattcaacttcttgagctccgcgtt
gacactgccggcggtttgaagaagaaagcgatccaatatatcttcgcaccagacgccatg
gaaaaggacttcattgcacgctttatggatactgtatctcaattgcttgaagatccggag
aacgccgcacgttcaagtcaagcatggattgtgtcttactttgagatatggaaggttctc
gcaacagaataccaaatggcaccttgtatgactttggcaaagccttctgagaaaattaat
ttgattacagatatcgccaacagcatttttggagatacacttgacctgccatatctggag
acagcgagttcctttccattcattgagccaatcgttcgcatgatgaaagataacagtgct
cccggaagaaacagaatcaatcaaccactccgtgcactattggagatgtgcgtaagacgt
gcatgctctgtctactctggcgatcgagctgaacatccccctccaaaagcattctgcatg
atcatccaggcgctcgcactgcattgtccggacgttatgcttcaagaggttaacaatgtg
gtccgactactcgagaatccacatgtcaacgttcggatggccacccttcaagctttagcc
gacatgttcgcatcgccgtatttgtcaaaagaactctgtgaagaattcaagacccgtatc
gacaaaagaaaaatcattttcaccagattatgtgctcatgtaattgacgaaggaacgaat
gttcgcacgaaatccatctcacttcttcgaagtctaatggagaatcggcgcattccagaa
gagttcgaaagtctaggatttttgacattggttgctggacgtttaaacgacaagtcagtg
caagtccgcaaggcggccatccaattcttgacttctttcttggacaacaatagacatgga
cacgatttttcaaaagctgtccatgtgaatctgatgcaagaaaaaaggctggaactacta
cgtctgaacacgccgaagtcacgagcgattcagcaagcagaagacgaatacatggcaaga
gacttccgactgaagaccgacatcaggcacgaactcacgggcattttcaaaggagaagtg
tccatcagtagagaagacgatataatgtgggtttttgaagataagcgtagtaatcaattt
cgaagctatttcagacctctcgccatcctgttaacggatttagatcgtcctggagtaggc
gccggtctcgctcgattctatgcgtctcaagaaaacttcccgtgcaatgccacccgccgg
aatgatcttccagatcatggtttggagttgttggatgaagcagttaggcacgtgcatgaa
tccggaaagctcgactatcagcagttcaagctccaaattcttcggaataacgacgaccaa
cttctggaagacgagcaagaagcgagggatcataagcacaaagtccagcagttgagagcg
caaatgcaacaattgatcaacaaaatgttgattggacttgaactcgagaaagctctgact
attgctcttcgttgtgtcttgatgggagaaactgctgaaatcaaagagggaatcaagttc
cttactcgttgtaaactgttcgggatcgctggagcggatgatgccatgcgttccatgtgc
tcactagtctggcgaccacatgcggatgtcctcaatgaacttattgaagcagccgaagac
atgttcatcagcaaattagagggaggcgaaaaagcagctgaaagagacaaatctacagtg
gaaaacctgatgtctgcaatggacggagtggcaaaaggagatcaagcatcagttgaagaa
gtcgtttaccttcttgcctcgaaggagttgccaagtacgcttggtgagaagaataataaa
gcaccacgaaagaggaggccaatggagacctctgtcattattaaactttggcatatcgct
ctagacacttccattggaaatgacaaccgcaaattggtggcactcaagatattgttcccg
atttcaagaactgagaaaggtcttccggaagcacgtagtagactacggtcactacagaga
aagctagatggggatccaaagattgctgtggctgctcttcgaatcatctccattttggga
ggacaaacggaacaagagaaggaggctgacgctttcaagcgtccaattttcagaattcat
caagacgactcattgttcaagtctatcgaaaatttcttcttccgtgtaaaaatattgtgt
tttgtagaagtcgtgaaagccgatgacagtcctgatcgagattggtttggcgttgttcgt
tacaccgtacacattctgctcaacatttctatggacgctaacatcatgcttccaagactt
gcctctcatttcttgtatcgtgctaagaggatctccgagtttttcatcttctacagcaag
caagcagaaggacccgtcgtcgatccagtgagaactgaagccgcgatccgacgcagagac
tattggggcttgacatggtgtcgagtgatggagaagcttatggcgttcattggagaagtg
gcctcacaggttcacgcctacacccaaattaccattccgcgtcttcacaccagatatatt
tcgaaaatgagagatgctgaaaaaagcgattcgaaactacgagaagagtcagttcgtttc
ctgactgatttggagaagtcaattgctcagaagaagacgattttcgcacttcccccacaa
gacaatacacaagcagcgacgactgatcattatttcttcgtcaagctcctttgtgataaa
agactcttcattccaagcaagcttctaggaagactactaccaattgttgtatatggaatg
cgagttaagactatgcccactcgcattaagcaagctgcaacaattgctttcgcaaagttc
atgccactcagtagtgaaattgcctcgtttggtgctccatcgttcttcggctcaatggtg
aattccaaccattctctcatcagatgtaatatgattgcttcgtgctgtgatttcgccttt
gcacagccaacaatcttcgaactctatgctcccaatctattcaaaatgtcgcaggacaag
tcagcagatgctcgagaatccgctctcttggttctcacccatctcatgtccaacgatatg
atccagacccgcggagttctctctgaatcagcccgttgcatttgcgatactgctcgccct
gtaagagaagcggcacaatcactcttcagagatctgaatgcacgcagtgagactgtcgtt
caacttcttccggaattcttgtatcgtctgtcggtcacttcggaaagactgtctatgaag
cagtacaagactgtgtttgaattcctgattgcacttctgaaggagaagtccagaacaaca
gatctgatgatcgatcgagtctgtttgaagttctcgaatattgatatgaacgacactgaa
gctccaaagtatcttctcattgctctcgccaaatttgcccaaaacgaaggaggcctggcc
aggctccacgataactggcgtcactggagtaagttcctgtgtcactcacaagtggccaga
gagtacgtccaaatgattgagcacatgcaaagcgtttcgaagaacgaagactacaagagt
caatgcagtgaactgatcgccagcatcaagaaggtcaatgaggaaggtttgaggaaggag
gatattaccgcagcgccccaagctgcaaagaaaaagggaagaggaagaaaggcggcggca
gctggtgcagacactccgagcacttctgctgctcgtactccgagaagaaaacgtggtcca
acaccgtcatatgaagaatcggaatatggtgaacaaatggaagaagacgaaagagaagaa
gaggaagaagaagtagaagaagtgtatgaagaagcagaaatggaagaggtaccagaggag
gaggaggaccccgaatacgattttgaacagtaa
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integrated database retrieval system