Citrobacter braakii: A6J81_00980
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Entry
A6J81_00980 CDS
T04825
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
cbra
Citrobacter braakii
Pathway
cbra03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
A6J81_00980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbra03400
]
A6J81_00980
Enzymes [BR:
cbra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
A6J81_00980
DNA repair and recombination proteins [BR:
cbra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
A6J81_00980
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A6J81_00980
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A6J81_00980
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
SKAP
Motif
Other DBs
NCBI-ProteinID:
ARC39404
LinkDB
All DBs
Position
complement(215399..216823)
Genome browser
AA seq
474 aa
AA seq
DB search
MNDGKQQPGFLFHDYETFGTHPALDRPAQFAAIRTDNDFNIIGEPEVFYCKPADDYLPQP
EAVLITGITPQEAREKGENEAAFAARIHALFTVPKTCILGYNNVRFDDEVTRNILYRNFY
DPYAWSWQNDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANGIEHANAH
DAMADVYATIAMAQLVKSRQPRLFDYLYSHRNKHKLAALIDVPQMKPLVHVSGMFGAWRG
NTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDALRERLYTAKADLGDNPAVPVKLV
HINKCPVLAQANTLRPEDADRLGINRQQCLDNLKVLRENPQVRDKVVAIFADAQPFMSSD
NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDISFVDKRIEKLLFNYRARNFPGTLDE
AEQQRWLDHRRQVFTPEFLQNYANELQMLSQQYADNKEKLMLLKSLWQYAQEIV
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacggcaagcagcaacctggttttctcttccacgattacgagacctttggtacc
catccggcgctggacaggcccgcgcaatttgcggctatccgcacagataacgatttcaac
atcatcggtgaacctgaagtcttttactgcaaacccgcagacgactatctgccgcagcct
gaggcggtgctgataaccggaatcaccccgcaggaagcacgtgaaaagggagagaatgaa
gccgcttttgctgcgcgcatccacgccctgttcaccgtgccgaaaacctgtatcctgggc
tataacaacgtgcgcttcgatgatgaggtgacgcgcaacattctgtatcgcaatttctac
gatccctatgcctggagctggcagaacgataattcacgctgggatctactggatgtgatg
cgcgcctgctatgccctgcgtcctgaaggcattaactggccggaaaacgacgacggctta
cccagttttcgcctggagcatttgaccaaagccaacggtattgaacacgccaatgcccac
gatgcgatggccgacgtttacgccacgatcgcgatggcacagttagtgaagtcgcgccag
ccgcgtctgtttgattatctctacagccatcgtaataagcacaagctggccgcgctgatt
gatgtcccgcaaatgaagccgttggttcatgtttcgggtatgtttggcgcgtggcgcggt
aacaccagttgggtggcaccattggcctggcacccggagaatcgcaacgcggtgattatg
gtcgacttagccggtgatatttcgccgctgctcgagctggacagcgacgcgctgcgtgag
cggctctacaccgctaaggcagatctgggagataaccccgctgtaccggttaaactggtg
cacatcaacaaatgtccggtcctggcacaagcgaacactctgcgcccggaagatgccgat
cgtcttggtattaaccgccagcaatgcctggacaatctcaaggttctgcgcgaaaaccct
caggtacgcgacaaagtcgtggctatcttcgccgatgcacaaccctttatgtcatctgat
aacgtagatgcccagttgtacaacggctttttcagcgatgccgaccgcgccgcgatgaaa
atcgttctggaaaccgaaccgcgcaatttaccggcgctggatatctcctttgtcgataaa
cgcattgaaaaactgctgtttaattaccgcgcgcgtaacttccccggaacgctggatgaa
gccgaacaacaacgctggctggaccatcgtcgtcaggtattcacgccggagtttttgcaa
aattatgccaatgaattacagatgctgagtcagcaatatgcggacaacaaagaaaagctg
atgctgctgaaatcactctggcagtatgcgcaagagattgtataa
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