Citrobacter braakii: A6J81_05915
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Entry
A6J81_05915 CDS
T04825
Symbol
nirD
Name
(GenBank) nitrite reductase (NAD(P)H) small subunit
KO
K00361
nitrite reductase [NAD(P)H] [EC:
1.7.1.4
]
Organism
cbra
Citrobacter braakii
Pathway
cbra00910
Nitrogen metabolism
cbra01100
Metabolic pathways
cbra01120
Microbial metabolism in diverse environments
cbra01310
Nitrogen cycle
Module
cbra_M00531
Assimilatory nitrate reduction, nitrate => ammonia
cbra_M00615
Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:
cbra00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
A6J81_05915 (nirD)
Enzymes [BR:
cbra01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.4 nitrite reductase [NAD(P)H]
A6J81_05915 (nirD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox
Rieske_2
Rubredoxin_C
NIR_SIR
Pyr_redox_3
Fer2_BFD
NIR_SIR_ferr
DAO
GIDA
AlaDh_PNT_C
FAD_binding_2
Rieske_4
NAD_binding_8
Hen1_LCD
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AVH83719
LinkDB
All DBs
Position
complement(1175851..1179915)
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AA seq
1354 aa
AA seq
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MTRLVIVGHGMAATRLIEALITYRDCNIAITVIGEEPQLAYNRIQLSPVLGGEKAFAQTL
LHPAQWYLDHGVTVLSGETVLTVDAASHSLTTTKRLMFWDELVFATGSYPFIPPIPGGKQ
PHVHAFRSMQDVEAILQRSGPKVVLGGGVLGIEAAAALHLNGDNVTLIHRTGRLMEQQLD
QLASDLLQAQLTSRGIRCELGSGITSIEADSVTLLDGQRIAANGVVIATGVKPNIRLAQA
CGVVCQQGIVVDDQLRTSTPNISAVGECCEINGQTWGLVAPCLKQAEVLAARLAGFTGAG
FGWQSSGTRLKVTGIDLFSAGVTDATATDAILSTYDPLSGHYRRLLTRDGKLHGVLLMGD
CRSAAPLTDLLAQGATAQSDWLFDRFDTQPSAAGQMTMTKPTLAVVGHGMVGHHFLEQCV
SRNLHLHYHIVVFGEERYAAYDRVHLSEYFAGRSAQSLSLVADDFFARNGIELRLGQCVT
GIDRETRVIRNTDGHETHWDALVLATGSYPFVPPVKGGDSPSCFVYRTLDDLDAIAAKAK
SARRGVVIGGGLLGLEAANALRQLGLETHVVEFAANLMAVQLDNAGAAMLREKIEALGVG
VHTAKSTTEIESTSDGLVLHFADGEKLETEMVVFSAGIRPQDALARRSGLNIGERGGICI
DNHCRTSDDAIFAIGECALWEGRVFGLVAPGYQMARVVAAQLAGDDVSFSGADMSTKLKL
LGVDVASFGDAHARTPGAKSYQWTHGPEQIYKKIVVSAEGKTLLGGVLVGDAGDYATLLQ
MMLNGMPLPGQPESLILPSLAGGASKALGVAALPDTAQICSCHNVSKADICQAVSAGATD
MGAIKQCTKAATGCGGCSALVKQVMEHQLAAQGVEVKKDICEHFPWSRQEIYHLVRVNHI
HTFEQLISRYGHGHGCEICKPLVGSVLASCWNEYLLKPAHLPLQDTNDRYFANIQKDGSY
SVVPRMPAGEVTPDGLIAIGQIAKRFQLYSKITGGQRVDLFGARLEQLPDIWRELVAAGF
ETGHAYGKSLRTVKSCVGSTWCRYGVQDSTAMAVILENRYKGLRAPHKIKMAVSGCTREC
AEAQGKDVGVIATDKGWNLYLCGNGGMKPRHACLFASDLDDAALLSTIDRFLMFYIRTAD
RLQRTSTWMDNLEGGIEYLREVILDDSLGIASELEQEMARVVESYQCEWQTTLSSPQRLA
LFRSYINSDEPDETIARAPLRGQPQLAASASRGRELLPTKPWQEICALDAIPEQAGIGAR
LGDVQIALFRFGQTIYALDNLEPGSSAQVLSRGILGDVQGEPIVISPLYKQRIRLRDGRQ
YDSGEQAVRAWPVKVEAGKVWVGTQALILRAEAS
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgactggtcattgtaggtcatggcatggcggcaactcgcctgattgaggcgctt
attacgtacagggattgcaacattgccatcacagttatcggtgaagagccgcagcttgct
tacaaccggatccaactttcaccggtactggggggagaaaaggcctttgcgcaaacctta
cttcacccggcgcagtggtatctcgaccacggcgtgacggtgctaagcggtgaaaccgtg
ctgactgttgatgccgccagccacagcctgaccacgacaaaacggcttatgttctgggat
gagctggtatttgccaccgggtcgtatccgtttattccgcccattcccggcggtaaacag
ccacatgttcatgcttttcgctcgatgcaggatgttgaggcgattctccagcggtctggt
ccaaaggtggtgctgggcggtggcgttcttggcatagaggcggcggcagcattacacctt
aatggtgacaacgtcacgttaattcatcgcacgggtaggctgatggaacaacagcttgat
caactggccagcgacctgttgcaggctcaactgacgagtcgtggcattcgctgtgaactt
ggttcaggcatcaccagtatcgaagccgacagcgtcacgttgctggatggccagcggatt
gcggcgaatggcgtggtgattgccacgggggtaaaacccaatatccgcctggcgcaggcg
tgcggcgtagtttgtcagcaggggatcgtggtggatgatcaacttcgcacctcaacgccc
aacattagcgctgtcggggaatgctgcgagattaacggccagacgtgggggctggtcgcg
ccgtgtctgaagcaggcagaggtgttggctgcgcgactggcgggttttaccggtgccgga
tttggctggcagtcgagcggaacgcgtctcaaggtgacgggcattgatctgtttagtgca
ggtgtaacagacgcgacggcgacggatgccatcctgagtacatacgatccgcttagcggg
cactaccgccgcttgctgacgcgtgacggaaaactccatggcgtgctgctgatgggcgat
tgccgcagcgccgcgccgttaaccgatttgctggcccagggggcgacagcacaatcagac
tggctcttcgaccgctttgatacgcagccatcggctgcaggacagatgacgatgacaaaa
ccgacgctggctgttgtgggacacggtatggttggccaccattttctcgagcaatgcgta
agccgtaatctgcatttgcattatcacatcgtggtgtttggcgaggaacgttatgccgcc
tatgaccgggtgcatctgtctgagtatttcgccgggcgcagcgcgcaatcactttcgctt
gtcgcagatgatttctttgcccgcaatggcatcgagctacgtttggggcaatgcgtgacc
gggatcgatcgtgaaacgcgcgtcatccgtaacaccgacggacatgaaacccactgggat
gcgctggtgcttgccaccggatcgtatccgtttgtccctcccgtgaaaggtggggattct
ccatcctgctttgtttatcgtacgttggacgatctggatgccattgcagcgaaagcgaaa
agtgcgcgccgcggggtggttatcggcggaggcctgcttggtctggaggcggcgaacgcg
ctgcgtcagcttgggctggaaacgcatgtcgttgaatttgcggctaatctgatggcggta
caactggataacgccggtgccgcgatgctgcgagaaaagatagaagcgctgggcgttggc
gtccacaccgcgaaatcgaccacggaaattgaaagcacttctgacgggctggtactgcac
tttgccgatggcgaaaagctggaaactgaaatggtggtcttttctgcggggattcgtccg
caggatgcgctggcgcgtcgtagcggattaaatattggcgaacgcggtgggatttgtatc
gataaccactgtcgcacgtcagatgacgccatttttgcaatcggcgaatgtgcgctgtgg
gaagggcgagtctttggccttgtcgcgccggggtatcaaatggcgcgggtggtcgccgca
cagctggccggagacgatgtcagctttagcggcgcggatatgagtaccaaactcaagctg
ctgggcgtcgatgtcgcttcttttggcgatgcgcatgcccgtacgccgggcgcgaaaagt
taccaatggacgcatggtcccgagcagatctacaaaaaaatcgtcgtcagcgcggagggc
aaaacgctgttgggtggagtgttggttggcgatgctggcgattacgccacgctactgcaa
atgatgctcaatgggatgccgcttcccggtcagccggaatcgctgatcctgccctcgctg
gcgggcggtgcgtcgaaagcgcttggggttgcggcattgcccgatactgcgcaaatctgc
tcttgtcataacgtcagtaaggccgatatatgtcaggcggtgagcgctggcgcgacggac
atgggcgccatcaagcagtgcacgaaggctgcgactggatgtggcggatgcagcgcgctg
gttaaacaagtgatggagcaccaacttgcggcccagggcgttgaggttaaaaaggatatc
tgtgaacactttccctggtcgcgccaggagatttatcacctggtacgggtgaaccatatt
catactttcgaacagttgattagccgttacggtcatggtcacggctgcgaaatctgcaaa
cctctggtggggtcagtgctggcgtcctgctggaatgagtatctgcttaaacctgcgcac
ttaccgttgcaggacactaacgatcgctattttgccaatattcaaaaagacggttcctat
tccgtggttccacgtatgcctgcgggagaggtcacaccagacggcctgatcgctataggc
cagattgcgaaacgtttccagctgtacagcaaaatcaccggcgggcagcgggtggatctt
ttcggtgcgcgtctggagcagttaccagatatctggcgcgagctggtggcggcggggttt
gaaacagggcatgcgtacgggaagtcgttgcgtacagtgaagtcctgcgtgggctcaacc
tggtgtcgctacggcgtacaggactcaacggcaatggcggtgatacttgaaaatcgctac
aaagggctgcgcgcgccacacaaaattaaaatggcggtttccggttgtacccgtgaatgc
gccgaggcgcagggcaaagatgtcggcgtcattgcgacggataaaggctggaatctctat
ctgtgcggcaacggaggaatgaaaccgcgccatgcctgtctgtttgccagtgatttggat
gatgccgcgctgctgagtaccatcgaccgtttcctgatgttctacattcgcaccgccgat
cgtctgcaacgtaccagcacctggatggataacctggaaggcggtattgaatatttacgt
gaggtgatccttgacgacagtttaggtattgccagcgaactggaacaagagatggcgcgg
gttgtggaaagttatcagtgtgaatggcaaaccacgctcagcagcccgcagcgcctggcg
ctgtttcgttcttacatcaatagtgatgagccggatgagacgattgcacgcgcgcctttg
cgcgggcagccgcagttggcggcatctgcatccagaggtcgggagttattaccgacaaaa
ccctggcaggagatatgcgcccttgatgcgatccctgagcaggcgggtattggtgcacgc
ctgggagacgtacaaatcgcgttatttcgctttgggcagacgatttatgcccttgataac
cttgaacccggtagttctgctcaggtgttatcacgcggtattctgggggacgtgcagggt
gagccgattgttatctcgccgctgtataaacaacgtattcgtctgcgcgatggccgccag
tatgacagcggagaacaggcggtacgcgcctggccggtgaaagtggaggctggaaaagtg
tgggtgggaactcaggcgctgatcctgcgggcggaggcatcatga
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