Citrobacter braakii: A6J81_06360
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Entry
A6J81_06360 CDS
T04825
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cbra
Citrobacter braakii
Brite
KEGG Orthology (KO) [BR:
cbra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbra03016
]
A6J81_06360
Enzymes [BR:
cbra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
A6J81_06360
Transfer RNA biogenesis [BR:
cbra03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A6J81_06360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
ARC40372
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All DBs
Position
complement(1268424..1269551)
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AA seq
375 aa
AA seq
DB search
MNYQMITTDDALATLCEAVREFPAIALDTEFVRTRTYYPQLGLIQLFDGKHVALIDPQGI
TDWSPLRDILRDTAITKFLHAGSEDLEVFLNAFGELPQPLIDTQILAAFCGRPLSWGFAA
MVEEFTGVALDKSESRTDWLARPLTERQCEYAAADVWYLLPITSKLMAETETSGWLPAAL
DECRLMQQRRQEILAPEDAWRDITNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVR
EEHLWAVARYMPGSLGELDSLGLSGSEIRFHGKTLISLVEKAQALPEESLPQPLLNLMDM
PGYRKAFKAIKALVAEVSAEQNLSIELLASRRQINQLLNWHWKLKPQQTLPELVSGWRGE
LMSDRLNALLQEYPQ
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatcaaatgatcaccacggacgacgcgttggccacgctgtgcgaagccgtccgt
gaatttccggcgatagccctggataccgaatttgttcgcacacgtacctattatccgcag
ttggggctgatccagctgtttgatggcaaacacgttgctctgattgatccgcaggggatc
accgactggtcgccgttgcgcgatattctgcgtgataccgccatcaccaagttcctgcat
gcgggcagtgaagacctggaagtgttcctcaacgcttttggcgaacttccgcagccgtta
attgatacacaaattctggccgctttttgcggtcgtccgctgtcgtggggctttgccgcg
atggtggaagagtttacgggcgtggcgctcgacaaaagcgagtcgcgtaccgactggctg
gccagaccgctgaccgaacgtcagtgcgaatatgcggcggctgacgtctggtatctgtta
ccgatcacctcaaagctgatggctgaaactgaaaccagcggttggctgccagccgcgctg
gacgaatgccgcttgatgcaacagcgtcgccaggagattctggcacctgaagatgcctgg
cgcgacatcaccaacgcctggcaactgcgtacccgtcagttagcctgcctgcaactgctt
gccgactggcggctgcgtaaagcgcgcgagcgcgatctggcggtaaacttcgtggtgcgt
gaagaacatctgtgggcggtggcacgttatatgccgggcagcctgggtgaactggatagc
ctgggtctttccggaagcgaaattcgcttccacggcaaaacgctgatctcgctggtagaa
aaggcccaggctttacctgaagagtcgttgccgcagccgctactgaatttgatggatatg
cctggatatcgcaaggcgttcaaagccatcaaggcgctggttgccgaagtgagtgcggaa
caaaatcttagcatcgaactgttggcttcccgccgtcagatcaaccagttgctcaactgg
cactggaaattaaagccgcagcagaccctgccggagctggtttccggctggcgtggcgaa
ctgatgtccgatcgtctcaacgcgctactgcaggaatatccgcagtaa
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