Citrobacter braakii: A6J81_09005
Help
Entry
A6J81_09005 CDS
T04825
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
cbra
Citrobacter braakii
Pathway
cbra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A6J81_09005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbra03019
]
A6J81_09005
Enzymes [BR:
cbra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A6J81_09005
Messenger RNA biogenesis [BR:
cbra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A6J81_09005
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
ARC40841
LinkDB
All DBs
Position
complement(1802346..1803689)
Genome browser
AA seq
447 aa
AA seq
DB search
MSFDSLGLNPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL
QHLITHQPHGKSRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM
KLRGGVDVLIATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDDIKSLAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
EKLLKKEIPRIATPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGAGRGQQPRRQDGGAPKA
KPRSGEGKPAGDKPRPPRRPRKPSTAQ
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcccttggtttaaaccctgatattttacgtgccgttgccgagcagggt
taccgtgaacctacccctattcagcagcaggcgatccctgccgtgctggaaggccgcgat
ctgatggccagcgcccagaccggcacggggaaaacggcaggttttaccctgccgctgttg
cagcacctgattactcatcagccgcatggtaaaagccgtcgtccggttcgtgcgctgatc
cttacgccaacccgcgaactggcagcccagattggcgaaaacgtccgtgattacagtaag
tatctgaatattcgctcgctggtggttttcggcggcgtcagtattaacccgcagatgatg
aagctgcgtggcggcgtggatgtgctgattgccactccgggtcgtttgctcgatctggag
caccagaatgcggtgaaactggatcaggttgaaatcctggtgctggatgaagctgaccgc
atgctggatatgggctttattcacgacattcgtcgcgttctggcgaaattgccggcaaaa
cgtcagaacctgctgttctcagccacgttctctgacgatatcaagtcgctggccgaaaag
ctgctgcacaatccgctggaaatcgaagtggcgcgtcgtaataccgcgtccgagcaggtg
actcagcacgttcatttcgtagataagaagcgtaaacgcgaactgttgtcgcagatgata
ggtcagggcaactggcagcaggtgctggtgtttacccgtaccaaacacggtgcgaaccat
ctggcggaacagctgaataaagacggtatccgcagcgcggcgatccacggtaacaaatct
cagggagcgcgtacgcgtgcgctggctgattttaaatccggtgatattcgcgtgctggtg
gcgaccgacattgccgcgcgcggcctggacattgaagaattgccgcatgtggtgaactac
gagttgccaaacgtcccggaagattacgtgcaccgaattggtcgtaccggtcgtgcggcc
gctactggcgaagcgttgtctctggtgtgcgtcgatgaacataagctgttgcgcgacatc
gagaagctgctgaaaaaagagatcccgcgtattgcaacgccaggctatgagccagacccg
tccatcaaagccgagccgatccagaatggtcgccagcagcgtggcggcggcggccgtggt
cagggtggagcagggcgtggccaacagccgcgtcgtcaggatggcggtgcgccaaaagcg
aaaccgcgtagcggcgaaggcaaaccggcaggcgacaagcctcgtccaccgcgccgtccg
cgcaaaccgtctacagcgcagtaa
DBGET
integrated database retrieval system
