Citrobacter braakii: A6J81_11285
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Entry
A6J81_11285 CDS
T04825
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cbra
Citrobacter braakii
Brite
KEGG Orthology (KO) [BR:
cbra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbra03400
]
A6J81_11285
DNA repair and recombination proteins [BR:
cbra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A6J81_11285
Archaeal homologous recombinant proteins
A6J81_11285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
ABC_tran
AAA_21
cobW
preATP-grasp_3
AAA_15
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ARC41255
LinkDB
All DBs
Position
2282345..2285488
Genome browser
AA seq
1047 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LNTVSQSQNDLMTRDTAECLAEVEFEVRGEAYRAFWSQNRARNQPEGNLQVPRVELARCA
DGKILADKVKDKLEMTAELTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE
IYGQISAMVFEKHKSARTALEKLQAQASGVALLAPEQVQSLTESLQVLTDEEKQYITSQH
VQQQHLNWLIRQNELQTDINRHQQALQAALQAQEDAQPQLAALSLAQPARALRPHWERIQ
EQTATIARTRQKIQEVNARLQSSLALRGRIRQQAHTQSTAMLAGQQTLTDWLNEHDRFRL
WSSELAGWKALLAQQSDARAQLRQWQQLRENDMRKLDALALPTLTLSPQEVTQALAQHVQ
RRPLRQRLSNLHGQIAPKQKQLAQLRATLVQRQHELTQRNAVLAEKRQRYKDKNQQLADV
RIICEQEARIKDLESQRALLQSGMPCPLCGSTAHPAIERYQTLELSVNQTRREALEKEVK
TLADEGSTLRGQLEAMSQQLQRDEREVQTLSQEEQALTQEWQTVTASLNVTLQPQDDIAP
WLATQEEHEQQLHQLSLRHTLQAQITAHTEQITQLQQHIDHRQAALTAELARHGLSLPAQ
DNVASWLSERANEAQMWQQRQSELSALQTQIAQLAPLLETLPETEALPENNEGLSLENWR
QVHDDCLSLQGQWQTLQQQEAQDVQRAAEIQAQFDAALQASIFTDRDAFIAALLDEETFT
RLEQLKQSLEGQQQQAQTLLNQAQQALATHQQQLPTGVDLTLTAQQLHDALAKLTQKLRD
NTTRQGEIRQQLKQDADSRQQQQALMQEIEKVAQQVEDWGYLNALIGSKEGDKFRKFAQG
LTLDNLVWLANNQLTRLHGRYLLQRKASEALELEVVDTWQADAVRDTRTLSGGESFLVSL
ALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNATGKTIGVISHVEAMK
ERIPVQIKVKKINGLGYSKLDKMFAVE
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagcctgcgcctgaaaaacctcaactccctgaagggagaatggaaagtc
gattttaccgccgagccttttgccagcaacgggctgtttgccatcaccggaccaacgggg
gcggggaaaaccaccctgctggacgcgatttgccttgcgctgtaccacgaaacgccacgc
ctgaataccgtgtcacagtcgcaaaacgacctgatgacccgcgacaccgcagagtgtctg
gccgaggtcgaatttgaggtgcggggcgaagcctaccgcgctttctggagtcagaaccgg
gcacgcaaccagcctgagggcaacctgcaggtcccgcgcgtagagctggcccgctgcgcc
gacggtaaaatcctcgccgataaagtcaaagacaagctggagatgaccgccgagcttacc
gggctggattacggtcgttttacccgttcgatgctgctgtctcaggggcagttcgccgca
tttcttaatgccaaaccgaaagagcgcgccgagctgctggaagagctaaccggcactgag
atctacggccaaatttccgcgatggtgtttgaaaaacacaaatcagcgcgtacggcgctg
gaaaaactgcaggcccaggccagcggcgttgcgctattagcaccagagcaggtgcaatcc
ctgacagagagtttgcaggtacttactgacgaagaaaaacaatacattaccagccagcac
gtccagcaacagcacctcaactggcttattcggcaaaatgagctacaaacggacataaat
cgccaccagcaggcattacaggctgctcttcaggcgcaagaagacgcgcagccacaactg
gcggcgctgagtctggcgcaaccggccagagcgttacgcccacactgggagcgaatccag
gaacaaacggctactatcgcgcgcacgcggcagaagattcaggaagtgaatgctcgctta
caaagcagcttagcgctgcgcgggcgcatccgtcagcaggcgcacacgcaatcgaccgcg
atgctcgccggacaacagacgctaaccgactggctgaacgaacatgaccgcttccgcttg
tggagtagcgaactggcaggctggaaagcgctgctggcccaacagtccgatgcccgtgcc
cagctacgccagtggcagcagttgcgagaaaacgacatgcgtaagctcgatgcgctggcg
cttcccacgctgaccctttcgccgcaggaggtaacacaagcgctggcgcaacatgtgcag
cgtcgtccgttacgccagcgactgagcaacctgcacggacaaatcgccccgaagcaaaag
cagctggcgcaactacgcgccacgcttgtacagcgtcagcatgagctgactcaacgcaac
gcggtgcttgccgaaaaacgtcaacgttataaagataaaaatcagcagcttgccgatgtg
agaatcatttgtgagcaggaagcccgtatcaaagatctggaaagccagcgggcattactg
caatccggcatgccttgcccgctttgcggctccaccgcacatccggcgattgagcgctat
caaacgctcgaactgagcgtgaatcagacgcgacgtgaggcgctggaaaaagaggttaaa
acgctggccgatgagggttcaacgctacgcggacagctcgaggcaatgagccagcagctt
cagcgggatgaacgcgaagtacagacgctttctcaggaggagcaagcacttactcaagag
tggcagacggtcaccgccagcctcaacgtgacgctacaaccgcaggatgacatcgcccca
tggcttgctacccaggaagagcatgagcagcagcttcaccaattgagcctgcgccatacc
ctgcaggcgcaaatcacagcgcatacagagcaaataactcagctccagcagcatattgac
caccgtcaggcggcgctaaccgccgagctggcccgtcatggcctgtcccttccggctcag
gataacgtcgcctcatggctgagcgaacgggcgaacgaagcccaaatgtggcaacaacgc
cagagcgaactgagcgctttacagacccaaatagctcagcttgcgccgctgctggaaacg
ctgccagaaaccgaggcgcttcctgaaaacaatgagggtctgtcgctggaaaactggcgg
caggtgcacgacgattgcctctccttacaggggcagtggcaaactttgcaacagcaggag
gcgcaggacgttcagcgcgccgcagaaattcaggcacagtttgatgccgcattgcaggcc
agtatttttaccgatcgcgatgcctttattgccgccctgctggatgaagagaccttcacc
cgtcttgaacagttaaagcagtcactcgaaggtcagcagcaacaggcgcaaaccctgctt
aatcaggctcagcaggcgctggcgactcatcaacaacagttgccaactggggtggatctc
acgctcacggcacaacaactgcacgacgcgctggcaaaactcacccagaagctacgggat
aacaccactcgtcagggcgaaattcgccagcagttgaaacaggatgctgacagccgccag
cagcagcaggcgctgatgcaggagatagaaaaggtcgcgcagcaggtcgaagactggggg
tatctgaatgcgctgatcggctcgaaagagggagataagttccgcaagtttgcccagggg
ctaacgctggataatctggtctggcttgccaacaaccagttgacccgtctgcacggccgc
tatctgttgcagcgcaaggccagcgaagcgctggagctggaagtggttgatacctggcag
gccgatgccgtgcgtgacacgcgcacgctctccggcggcgagagcttcctcgtgagtctg
gcgctggcgctggcgttgtccgatctggtcagccacaaaacgcggattgactccctgttc
ctcgacgaaggtttcggcacgctggacagcgaaacgctggataccgccctggatgcgctg
gatgcgcttaatgccaccggcaaaacgattggcgtcatcagccacgttgaagcgatgaaa
gagcgcattccggtacagatcaaggttaaaaaaatcaacggactgggctacagcaaactc
gacaagatgtttgcggtggagtaa
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