Citrobacter braakii: A6J81_13105
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Entry
A6J81_13105 CDS
T04825
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
cbra
Citrobacter braakii
Brite
KEGG Orthology (KO) [BR:
cbra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbra03021
]
A6J81_13105
Transcription machinery [BR:
cbra03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
A6J81_13105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
Flavi_DEAD
AAA_34
MiaE
Motif
Other DBs
NCBI-ProteinID:
ARC41585
LinkDB
All DBs
Position
2683815..2686721
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AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAMDARTVTLLFSSTGENRLYARSDSPVTRVMFNPGDT
ITSHEGWQLHVDEVKEENGLLAYIGTRLDTEETGVTLREVLLDSKLVFSKPQDRLFAGQI
DRMDRFALRYRARKFQSKQYRMPWSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEALH
DAYNPFETEQLVICSLDFARRSKQRLEHLCDAEWDLLIVDEAHHLVWSEDAPSREYMAVE
QLAERVPGILLLTATPEQLGLESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL
AGNKLSNNELNMLGDMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPEQIYQEFEGD
TGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKATTALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFSEEDSGAQVMLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDTVYNNLIGYLAEPENT
DGFDDLIKTCREQHDALKAQLEQGRDRLLEIHSNGGEKAQRLAESIEEQDDDTSLIAFAM
NLFDIVGINQDDRGDNLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWE
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELVYVVEAQAPKQLQLNRFLPPTP
VRMLLDKNGNNLAAQVEFETFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGEAQVEKSAR
ALIDAARKEADEKLTAELSRLEALRAVNPNIRDDELSAIESNHQQVMESLDQAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacagaaagcgaattgggacttggt
actgttgtcgccatggatgcgcgaaccgtcactttacttttctcatcgacgggcgaaaac
cgtctgtatgcgcgcagtgattcccccgtgacccgcgtgatgttcaatcctggtgatacg
ataacgagccatgaaggctggcaactgcatgtcgatgaagtaaaagaagaaaacggcctg
cttgcctatatcggaacccgccttgatacagaagaaaccggtgtaacgctgcgtgaagtg
ctgctcgacagcaaactggtattcagcaaaccacaggatcgcctgtttgccggtcagatt
gaccgtatggaccgctttgcgctgcgctatcgcgcgcgtaaatttcagagcaagcagtac
cgtatgccgtggagtggtttgcgtggtcaacgtaccagcctgatcccccaccagctcaac
attgcccatgatgttggccgccgccatgctcctcgcgttctgctggctgatgaagttggt
ttaggtaaaaccattgaagccgggatgatattgcatcaacagctactttccggcgctgca
gaacgcgtgctaatcatcgtcccggagacgctacagcaccagtggctggtcgaaatgctg
cgccgtttcaacctgcgctttgcgctgttcgatgatgagcgttatgcagaggcgctgcac
gacgcctacaacccgtttgaaaccgaacagttggttatctgctcgctggactttgcccgt
cgcagtaaacagcgtctggagcacctctgtgacgccgaatgggatctgctgatcgttgat
gaagcccaccacctggtgtggagcgaagacgcgcccagccgtgaatatatggccgttgaa
caactggcagagcgcgtgccgggtatcctgttgctgaccgcaacgcctgaacagctgggc
ctggaaagccactttgcgcgcctgcgcctgctggatccaaaccgtttccacgatttcgcc
cagtttgttgaagaacagaaaaactaccgaccggtcgccgacgccgtcgccatgctgctg
gcaggcaacaagctgagcaacaatgagctgaacatgttaggcgacatgattggcgaacag
gacattgagccgttattgcaggcggcaaacagcgacagcgaagacgcccagagcgcacgc
caggaactggtttcgatgctaatggaccgccacggtaccagccgcgtgctgttccgtaat
acccgtaacggtgtgaaaggctttccgaaacgcgaactgcataccatcaaattaccgttg
ccaacccaataccagacggcgattaaggtctccggcattatgggcgcgcgtaagagtgcg
gaagaccgggcgcgcgacatgctctacccggaacagatttatcaggagttcgaaggcgac
actggcacctggtggaactttgacccacgcgtggaatggctgatgggctacctgaccagc
caccgctcgcaaaaagtactggtcatctgcgcgaaagccaccaccgcgcttcaactggag
caggtactgcgcgagcgtgaaggtatccgcgccgccgtgttccatgaagggatgtcgatc
attgaacgtgaccgcgcggcggcctggtttagcgaagaagatagcggcgcccaggtgatg
ctgtgctctgaaatcggctccgagggacgtaacttccagttcgccagcaatctggtgatg
tttgatctgccgttcaacccggacctgctggaacagcgtattggccgtctggaccgtatt
ggtcaggcgcatgatatccagatccacgttccatacctggaaaaaaccgcgcaatccgtg
ctggtgcgctggtaccacgaaggtctggatgcgtttgaacacacctgtccgaccggacgc
accatctatgacacagtctataacaatctaatcggctacctggctgagccagaaaacacc
gatggctttgacgatctgatcaagacctgccgcgaacagcatgacgcgctgaaagcacag
ctggagcaagggcgcgatcgcctgctggagatccattcgaacggcggcgaaaaagctcag
cggcttgctgaaagtattgaagagcaggacgacgataccagtctgatcgccttcgcgatg
aacctgtttgatatcgttggtattaatcaggatgaccgtggcgacaatttgatcgtgctg
acaccgtccgatcatatgctggtgccagatttccctggactgccggaagatggctgcacc
attacgtttgagcgcgatgtcgccctgtcacgtgaagacgcacagtttattacctgggag
catccgctgatccgcaatggtctggatctgatcctctccggcgacaccggaagcagcact
atttcgttgttgaaaaacaaagcgttaccggtcggtactctgctggttgagttggtctac
gttgttgaagcgcaagcgccgaaacaactgcagttaaaccgtttcctgccgccaacgccg
gtacgtatgttgctggacaaaaacggcaataaccttgccgcgcaggttgaattcgaaacc
tttaaccgtcagctcagcgccgttaaccgccataccggcagcaaactggtcaacgccgtc
cagcaggatgttcatgccattctgcaactcggcgaagcgcaggtggaaaaatcggcccgc
gcgctgatcgacgcggcgcgtaaagaagcggacgagaagctgacggcagaactctcccgt
ctggaagcgctgcgcgccgttaacccgaatatccgtgatgacgaactcagcgcaattgaa
agcaaccatcaacaggtgatggaaagcctggatcaggcaggctggcgtctggatgccctg
cgcctgatcgtcgtgacgcatcagtaa
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