Citrobacter braakii: A6J81_16700
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Entry
A6J81_16700 CDS
T04825
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cbra
Citrobacter braakii
Pathway
cbra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A6J81_16700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbra03019
]
A6J81_16700
03400 DNA repair and recombination proteins [BR:
cbra03400
]
A6J81_16700
Enzymes [BR:
cbra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A6J81_16700
Messenger RNA biogenesis [BR:
cbra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A6J81_16700
DNA repair and recombination proteins [BR:
cbra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A6J81_16700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ARC42230
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All DBs
Position
complement(3432291..3434120)
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AA seq
609 aa
AA seq
DB search
MAQAEVLNLEMGAKQVLQETFGYQQFRPGQEEIIDTVISGRDCLVVMPTGGGKSLCYQIP
ALLLNGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRSGQIRLLY
IAPERLMLDNFLENLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPSLPFVAL
TATADETTRLDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGI
IYCNSRAKVEDTAARLQSRGISAGAYHAGLENAVRAEVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGQL
LDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGLMDARKAL
STIYRVNQRFGMGYVVEVLRGANNQRIRELAHDKLPVYGIGREQSHEHWVSVIRQLIHLG
LVTQNIAHHSALQLTEAARPVLRGDVALQLAVPRIVALKPRAMQKSFGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPVSPSEMLSVNGVGMRKLERFGKEFMALIR
AHVDGDDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtgttgaatctggaaatgggcgctaaacaggttttgcaggaaacc
tttggctaccaacagtttcgccccggtcaggaagaaatcattgataccgtgatctctggt
cgcgactgcctggtcgttatgccgaccggtggcggtaaatccctgtgctatcaaattccc
gcattattgcttaacgggctcaccgttgttgtttctccgctgatttccctgatgaaagat
caggtcgatcaactgctggccaacggcgtggcggctgcgtgtctgaactccacccaaagt
cgtgagcagcagcttgaggtcatggcaggttgtcgcagcgggcagattcgcttgttgtac
attgcgccagaacgtctgatgctggataacttccttgaaaatctggcgcactggaatccg
gtattgctggccgttgatgaagcgcactgtatctcgcagtgggggcatgatttccgcccg
gaatacgccgcgctgggacagttgcgccagcgtttcccgagcctgccgtttgtggcgctg
accgcaacggcggatgaaaccacccggctggatattgtgcgtctgctggggctcaacgat
ccgttaattcagatcagcagctttgaccgcccgaatattcgctacatgctgatggagaaa
tttaagccgctcgatcagctgatgcgctacgtgcaagagcagcgcggtaagtctggaatt
atctactgcaacagccgcgccaaagttgaagataccgccgcgcgtttgcaaagccggggt
atcagcgccggggcttatcatgccgggctggaaaacgccgtacgcgctgaagtgcaggag
aaattccagcgcgatgacctgcaaatcgtggtagcgaccgtggcgttcggtatgggaatc
aacaaacctaacgtacgcttcgtggtgcatttcgatattccgcgcaatatcgaatcctat
taccaggaaacaggccgtgccggacgtgacggcctgccggcggaagcgatgctgttttac
gatccggcggatatggcatggctgcgccgttgccttgaagaaaaacccgcaggacagctg
ctggatatcgaacggcacaagctcaatgcgatgggggcatttgccgaggcgcaaacctgt
cgtcgtctggtgctgctgaactattttggcgaagggcggcaggagccctgtggtaactgc
gatatctgcctcgatccgccaaaacagtacgatggacttatggacgcgcgcaaagcgctg
tcgactatctaccgtgtgaatcaacgctttggtatgggttacgtcgtggaggttctgcgc
ggagcgaataaccagcgtattcgcgaactggctcatgacaagctgccggtctatggcatt
ggccgtgagcaaagccatgaacattgggttagcgttattcgccagcttattcatcttggt
ctggtgacgcagaatattgctcatcactctgcgttacagctaactgaagccgcgcgtccg
gtgctgcgtggtgacgttgcgctacagcttgcggtaccgcgtattgtggcgctgaaaccg
cgtgcgatgcagaaatccttcggcggcaactatgaccgcaaactgttcgccaaattgcgt
aagctgcgtaaagccattgccgatgaagagaatatcccgccgtatgtcgtctttaacgac
gccacgttgattgaaatggccgagcagatgccggtttcgccgagcgaaatgctgagcgtc
aacggtgtggggatgcgtaaacttgagcgttttggcaaagagtttatggcacttattcgc
gcgcacgttgatggtgacgacgaagagtag
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