Citrobacter braakii: A6J81_16725
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Entry
A6J81_16725 CDS
T04825
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cbra
Citrobacter braakii
Pathway
cbra03420
Nucleotide excision repair
cbra03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A6J81_16725
03430 Mismatch repair
A6J81_16725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbra03400
]
A6J81_16725
Enzymes [BR:
cbra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A6J81_16725
DNA repair and recombination proteins [BR:
cbra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A6J81_16725
MMR (mismatch excision repair)
Other MMR factors
A6J81_16725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ARC42235
LinkDB
All DBs
Position
complement(3438219..3440381)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAAPRSNMLVLAGAGSGKTRVLVHRIAWLLTVENNSPYSIMAV
TFTNKAAAEMRHRIGQIMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWFINSQKDEGLRPHHLQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLTDFPGAETIRLEQNYRSTNNILSAANALIENN
NGRLGKKLWTDGVDGEPISLYCAFNELDEARFVVNRIKTWQDNGGALEQCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ
TDRVIKDSGLRMMYEQEKGEKGQTRIENLDELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEACVEEVRLRATVSRPVSHQRMG
TPMAENDTGYKLGQRVRHAKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagccttaatgataaacagcgtgaagcggtggccgcg
ccacgcagcaacatgctggttttggcaggcgcggggagtggtaaaacgcgcgtgctggtg
caccgtatcgcctggttactgacggttgagaacaactcgccgtactccattatggcggtg
acttttaccaacaaagcggcggcggaaatgcgccaccgtattggtcagatcatgggaacc
agccagggcggtatgtgggtgggtacattccacggtctggcgcaccgtctgctgcgcgcg
caccatatggatgcaaacttgccgcaggatttccagatcctcgacagcgaagaccaactg
cgtttgcttaagcgtctgatcaaggcgatgaaccttgatgagaagcagtggccaccgcgt
caggcgatgtggttcatcaatagccagaaagacgaaggtctgcgtccgcatcatctgcaa
agctacggtaacccggttgagcaaacctggcagaaagtgtatcaggcttaccaggaagcg
tgtgaccgcgcggggctggtggatttcgccgagctgctgctgcgcgctcatgaactgtgg
cttaacaagccgcatatcctgcagcactaccgcgaacgctttaccaatatcctggtggac
gaattccaggataccaacaacattcagtacgcgtggatccgcctgctggcgggcgatacc
ggcaaagtgatgatcgtgggtgatgacgatcagtcgatctacggctggcgcggagcgcag
gtggaaaacatccagcgcttcctcacggatttcccgggcgcagaaaccattcgtctggag
cagaactaccgttcgaccaacaatatcctcagcgcggctaacgccctgattgaaaacaat
aatgggcgtctgggtaaaaagctgtggaccgatggcgttgatggcgaaccgatctcgctt
tactgcgcgttcaacgaactcgatgaagcgcgctttgtggtcaatcgtatcaaaacctgg
caggacaacggcggtgcgctggaacaatgcgccattctgtatcgcagcaacgcccagtcg
cgcgtactggaagaggcgctgttacaagccagcatgccgtatcggatctatggcgggatg
cgcttcttcgaacgccaggaaatcaaagatgcgctctcttacctgcgcctgatcgccaac
cgcaatgacgacgccgcgtttgaacgcgtggtgaatacgccaacccgcgggattggcgat
cgtactttagatgtggtgcgtcagacctcccgtgaccgtcagctaacgctgtggcaggcc
tgtcgtgagctgttgcaggaaaaagcgctcgcgggtcgcgccgccagcgccttacagcgc
tttatggagctgattgacgcactggcccaggagaccgcggatatgccgctgcacgtgcag
actgaccgggtgattaaagactccggcctgcgcatgatgtacgagcaggaaaaaggcgag
aagggccagacgcgtatcgaaaacttagacgaattggtgacggcaacgcgccagttcagc
tacaacgaagaagacgaagacttaatgccgctgcaggcgtttctgtctcacgccgcgctg
gaagcaggcgaagggcaagcggatacctggcaggacgcggttcagctgatgacgctgcac
tcggcgaaaggtctggaattcccgcaggtgtttatcgtggggatggaagaaggcatgttc
cccagccaaatgtcgctggacgaaggtggtcgcctcgaagaagagcgccgcctggcttac
gtcggcgtgacccgcgcgatgcaaaagctgacgctgacctacgccgaaacacgtcgtctg
tacggcaaagaggtttaccatcgtccgtcgcgctttatcggcgaactgccggaagcgtgc
gttgaagaggttcgcctgcgcgccacggtcagccgtccggtgagccatcagcggatgggc
acgccaatggcggaaaacgataccggctacaagctcggtcagcgcgtgcgccatgctaaa
tttggcgagggcaccatcgtcaacctggaaggaagcggcgagcatagtcgtttgcaggtc
gcgttccaggggcaggggatcaaatggctggtagcggcctacgccagactggaaacggtt
taa
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