Citrobacter braakii: A6J81_21940
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Entry
A6J81_21940 CDS
T04825
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
cbra
Citrobacter braakii
Pathway
cbra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A6J81_21940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbra03400
]
A6J81_21940
Enzymes [BR:
cbra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A6J81_21940
DNA repair and recombination proteins [BR:
cbra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A6J81_21940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AVH83810
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Position
4504824..4508192
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AA seq
1122 aa
AA seq
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MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLAQKFSIAANI
DFPLPASFIWDMFVRVLPDIPKESAFSKQSMSWKLMTLLPQLLDGDDFALLRHYLTDDTD
KRKLFQLSSRAADLFDQYLVYRPDWLTQWEAGRLVDGLGESQAWQAPLWKALVEYTEELG
QPRWHRANLYQRFIQTLESASECPQGLPSRVFICGISALPPVYLQALQALGKHIDIHLLF
TNPCRYYWGDIKDPAWLAKLMARQRRHSFEERHLPLFRDSQKAEGLFNSDGEQDVGNPML
ASWGKLGRDYIYLLSELENSQELDAFVDITPDNLLHNIQSDILELESHAVAGVTLEEYSR
SDNKRRLELNDTSVTFHVCHSPQREVEILHDRLLAMLEADPTLTPRDIIVMVADIDSYSP
FIQSVFGSAPAERYLPYAISDRRARQSHPVLQAFISLLSLPDSRFVSEDVLALLDVPVLA
ARFNIDEEGLRYLRLWVNESGIRWGIDDDNVRELELPPTGQHTWQFGLTRMLLGYAMESA
QGEWQSVLPYDESSGLIAELVGHLASLLMQLNLWRRGLAQERPLEEWLPVCRDMLNDFFL
PDADTEAAMTLIEQQWQAIITEGLGAEYGEAVPLSLLRDELAQRLDQERISQRFLAGPVN
ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPMRGDRSRRDDDRYLFLEAL
ISAQQTLYISYIGRSIQDNSERFPSVLVQELMDYIGQSHYLPGDESLTCDQSEARVKAHV
TRLHTRMPFDAQNYLPGEQQSYAREWLPAASLSGKAHSDFVQPLPFEIPETLTLETLQRF
WAHPVRAFFQMRLRVNFRSEESEIPDTEPFTLEGLTRYQLNQQLLNTLVEENDAERLFRR
FRAAGALPYGPFGEILWDTQRQEMQSLAERIIACRQPCQSMEIDLNCNGVQITGWLPQVQ
EDGLLRWRPSLISIAQGVQLWLEHLVYCASGGMGESRLFLRKDGEWRFPPLDAEQALLYL
SQLIEGYREGMSSPLLVLPESGGAWIKTCYDAANDAMLDDDATLQKARSKFLQAYEGNMI
VRGEGDDIWYQRLWRQLDADTLETIVLQSQHYLLPIFRFNQS
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgttaagggtctaccactccaatcgtctggatgtgctggaagcgttaatggaatttatc
gttgagcgcgagcggctggacgacccctttgaacctgagatgatcctggttcaaagtacc
ggcatggcgcagtggctacaaatgacccttgcacagaagtttagtattgccgccaacatc
gattttccgctgcctgcgagttttatctgggatatgtttgtgcgcgtgctgccggatatc
ccgaaagagagcgcgtttagcaaacagagcatgagttggaagttgatgacgctgttgccg
cagttactggatggcgatgatttcgcattgctgcgccactatctgacggacgacaccgat
aagcgcaagctgtttcagctttcctcgcgtgctgctgacctttttgaccagtatttagtc
taccgccctgactggttgacccagtgggaagccgggcgactggttgacggacttggcgag
tctcaggcctggcaggccccgttgtggaaagcgctggtggaatacactgaggaattgggc
cagccgcgctggcatcgtgccaatttataccaacgttttattcagaccctggaaagtgcg
tccgagtgcccgcagggactgccttctcgcgtctttatttgcggtatttcggcgctgccg
ccggtttatttgcaggcattgcaggctctgggtaagcacattgatattcatctgctgttt
accaacccttgtcgctactactggggggatataaaagatcccgcctggctggcgaagctg
atggcgcgtcagcgtcggcacagctttgaagaacgccatctgccgttgtttcgtgacagt
cagaaagctgaaggattatttaatagcgatggcgaacaggatgtgggcaacccgatgctg
gcctcatggggcaaactggggcgcgattacatttatctgctttcagaactagagaatagt
caggagctggatgcgttcgtcgatattacacctgacaatcttttgcacaatattcaatcg
gatattctggagcttgaaagtcatgctgtggcgggcgttacgctggaagaatattcccgg
agcgacaataaacgccggcttgagctgaacgataccagcgtgactttccatgtctgccat
agcccacagcgcgaggtagaaattcttcatgaccgcttgctggcaatgctggaagcggat
ccaacgctgacgccgcgcgatattatcgtgatggtggcggatatcgatagctacagtcca
ttcattcagtcggtctttggcagcgcgccagccgagcgttacttaccttacgcgatttcc
gatcgtcgggcgcgccagtctcatcccgtcttacaggcctttattagcctgctgtcgctg
ccggatagccgttttgtctcagaggatgtcctggcgttactggatgttcccgtgctggcg
gcgcgtttcaatatcgatgaagaggggctgcgctatcttcgcttatgggtcaatgaatcc
ggtattcgctggggaattgacgacgataacgtgcgtgagctggagcttccgcctacaggt
cagcatacctggcaatttggtttaacgcgtatgctgctcggctacgcgatggaaagcgcg
cagggcgagtggcaatcggtattgccttacgatgagtccagcggattgattgccgagctg
gtagggcatctggcctcgttgctgatgcagctcaatctttggcgtagagggttagcgcag
gaacgaccgctggaagaatggctacctgtttgccgggacatgcttaatgatttcttcctg
ccggacgcggataccgaagcggcgatgacgctgattgaacagcagtggcaggccattatc
actgaaggtttgggagccgagtatggcgaggccgtaccgctctctctgttacgtgatgag
ctggcgcagcgtcttgaccaggagcgcatcagccagcgcttcctggcggggcccgttaac
atttgtacgctgatgccgatgcgttctattcctttcaaggtggtgtgcctgctgggcatg
aacgatggcgtttatccgcgccagcttgcgccgctgggctttgatttaatgagccaaaaa
ccgatgcggggcgatcgtagtcgtcgcgatgatgaccgctatctgttcctcgaagcattg
atttcggcacagcaaacgctctatatcagctacattggccgatccattcaggacaacagc
gagcgcttcccgtcggttctggtacaggaattgatggactacattgggcaaagccactat
ctgccgggcgatgaatcgttaacctgcgatcaaagcgaggcccgggtaaaagcgcacgtt
acccgtttgcatacccgtatgccctttgatgcacaaaactatctaccgggtgaacagcaa
agctatgcccgggaatggctgcctgcggcgagtctgtcaggaaaagcgcactcggacttt
gtacagcctctgccctttgagatacccgaaacgctgacgctggaaacgctgcagcgattt
tgggctcatccggtacgcgcctttttccagatgcgtttgagggttaatttccgctctgaa
gagagtgagatccccgatacggaacctttcacccttgaaggattaacccgctatcaactt
aatcagcaattgcttaatacgctggttgaagagaacgatgctgaacggctgttccgccgt
tttcgtgcggcgggcgcgctaccctatgggccatttggcgaaattctgtgggatacgcag
cgtcaggagatgcagtcgctggctgaacgcattatcgcctgtcgccagccctgtcagagc
atggaaatcgatcttaactgtaacggcgtgcaaatcaccggttggctgccgcaggtacaa
gaggacggtttgttgcgctggcgcccatctttgataagcattgcgcaaggtgtgcaactt
tggctggaacatcttgtctattgtgccagtggcggtatgggagagagccggttgttcctg
cgtaaagacggggaatggcgttttccgccgctggatgcagaacaggcgttactgtacctg
tcgcaactcattgaggggtatcgggaaggcatgtcgtcaccgttgctggtgttgcccgaa
agcggcggtgcatggataaaaacctgttatgacgccgcaaatgatgccatgttagatgac
gatgcaacgttgcaaaaagcgcgcagtaagtttctgcaggcctatgaaggcaacatgata
gtacgaggtgaaggcgacgacatctggtatcagcgtctttggcgacaactggatgctgat
acgctggagaccattgttttacagtctcagcactacctgttaccgatttttcgctttaat
cagtcatga
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