Corvus brachyrhynchos (American crow): 103611195
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Entry
103611195 CDS
T08418
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103611195 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbrc03021
]
103611195 (POLR1A)
Enzymes [BR:
cbrc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103611195 (POLR1A)
Transcription machinery [BR:
cbrc03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
103611195 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
HMG_box
Motif
Other DBs
NCBI-GeneID:
103611195
NCBI-ProteinID:
XP_017583264
LinkDB
All DBs
Position
Unknown
AA seq
1641 aa
AA seq
DB search
MQNFSNCPGHFGHIELPLTVYNPLFFDKLYLLIRGSCLNCHMLTCPRAVVHLLLSQLKVL
EKGLLHAVYDLEIILNRFVEQCADATGSEIEEELNRHVQEMLQSSQIRDRCSNVKNVCEC
RNKLIAQFWKAHMGSKKCPNCKSRRSLVRKEHNSKLTVTYPSTVYHKSGEEGILDEIAGI
DESQLGKRGYLTPMTAKEYILALWKNEGFFLHYLFPGMDPHESSGFSPDMFFLDLLVVPP
SRYRPVNRVGDRLFTNGQTVNLQAVMKDAQLIRKLLVFMAKEQCQPIKIAEEIQTETGGD
SEPLDRSVLATIPGQSIADKLYNAWIRLQSHVNIVFDSDMDKLITEKYPGIRQLLEKKEG
LFRKHMMGKRVDFAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKELRQAVIN
GPKVHPGASMVINEDGSRTVLSATSLTQREAIAKQLLTPSSGAPQTGLKIVCRHIKNGDV
LLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAE
AYTLAFTDEQYLVPKDGKPLPGLIQDHMISGVSMTIRGCFFTREQYMELVYRGLTDKKGR
IKIFPPAIMKPQRLWTGKQVVSTLLINIIPDNHAPLNLTGKAKIGGRAWIKGPAKGFLNL
DSMCESQVIIRDGELLCGVLDKAHFGSSAYGLVHCCYEIYGGETSGKVLTCLGRLFTAYL
QLYRGFTMGIEDILVKPEADHKRKKIIERSRQSGIEAVRAALNLPETASCEEVQGKWQDA
HLCKDQRDFNMVDMKFKEEVNNYNNEVNKVCMPLGLHRSFPENNLQLMVQSGAKGSTVNT
MQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPSSGGFVTGRFLTGIRPSEFFFHCM
AGREGLVDTAVKPSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKT
QFLQPEQFPFIAENYEVIQKTNHLDEALARMESYQAKQQFKAIKKWRARHQNSVQREGGF
LLFSQKKLASVKAQLPGGEMKNGRDPATLQLLKMWYELDEKKRRKYLKKTNKCPDPSLGV
WRPDTNFASVSETFENGVEGYISKWESENSRSYMQSALSADRLKDLLYLKWQRSLCDPGE
AVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASSNIKTPMMSVPVF
NTKKALKKVKQLKKQLTRVCLAEVLQKVDIEESLHVKHKLNKHHLYKIKFHFLPHEDYRE
EKCVKPRQILHFMETRFFKVFLEAIKRKTTKMASFNEVSTRKTTRKDLDDDQDKTLNSLE
AVAEEEENIVDAEADEGDGDATEVKRRKNQEEEVDYESEEENGEENVNENPEDEEAESEK
EEGTPGAEEDQNRAEGEDSQNPSFLSQTKKGKDRLLQSAEVRVSAVVESHPSIQDYTFDT
ENELWCEVSLALPLTKVYFDLSSLLASLARSTVIHEVKGITRCLLNESTNKEGEKEFVLH
TEGINLTELFRYSDILDLNRLYSNDIHAMAKNYGIESALRVIIKEVKDVFAVYGIVVDPR
HLSLVADYMCFEGIYKPLSRFGIQSNSSPLQQMTFETSYKFLKEATMMGAHDELRSPSAC
LVVGKVVKGGTGLFDLKQPLT
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacttcagcaactgccccggacactttggccatatagaactgcctctgactgtc
tacaaccccctgttcttcgataaattataccttctaatccgaggatcttgtttgaattgt
cacatgctgacatgtcctcgagccgtggttcacttactgctaagtcagctgaaggtgcta
gagaaggggctgcttcacgctgtctatgaccttgaaatcattctgaacaggtttgtagag
caatgtgcagatgcaacaggctcagaaattgaagaagagttaaatcgccatgtccaggaa
atgttacaaagctctcaaataagagatcggtgttctaatgtcaaaaatgtgtgtgagtgt
agaaataaactgatagcacagttctggaaagcgcacatgggttcaaagaaatgcccaaac
tgcaaatccaggagatcactggtgcgaaaggagcacaacagcaagctgacagtaacctat
ccttccacagtgtaccataagtcaggagaggaaggcattctggatgaaatagcaggtatt
gatgaaagccagttagggaagagaggatacctgacaccaatgactgccaaggaatacatc
ctggctctgtggaagaatgaaggtttctttctgcattatctcttccctgggatggatccc
catgaaagttcaggattcagtccagacatgttttttttagatctacttgtggttccacct
tcaaggtatcgtcccgtaaatcgcgttggagaccgcctgttcacaaatgggcagactgtg
aacttgcaggctgtgatgaaagatgcccagttaatacggaagctcttggttttcatggca
aaagagcagtgtcagccaataaaaattgcagaagaaattcaaacagagacaggaggggat
agtgaacctctggaccgttctgtgctggcaacgattcctggacagagcattgcagataag
ctgtacaatgcttggatacgtctccagagccatgtcaacattgtgtttgatagtgacatg
gacaagctgataacagaaaaataccctggtattcgtcagctgctggagaagaaggaaggg
ctgttccgcaagcacatgatggggaagcgtgtggattttgctgctcgatccgtcatttgc
cctgatatgtacatcgggaccaatgagattggcatccctatggtatttgctaccaaactg
acttaccctcagccagtcactccctggaatgtcaaagagctgaggcaggctgtcattaat
ggccccaaggtccaccctggggcctccatggtcattaatgaggacgggtctcgcacggtg
ctgagtgccaccagcctgacccagcgcgaggccatcgccaagcagctcctcaccccctcc
tcaggggcaccccagacagggctgaagattgtgtgtcggcacattaagaacggggatgtg
ctgttactgaaccgccagcccacgcttcacagaccttccatccaagctcaccgggcccga
atcctgcctggggagaaagtgctgaggcttcactatgccaactgcaaggcttacaatgct
gactttgatggggatgaaatgaacgcccatttcccgcagagcgagctgggcagagcggaa
gcctacaccttagccttcactgatgaacagtacctcgtgccaaaggatgggaagccgctt
cctggcttgatccaagatcacatgatttctggagtcagcatgacgatccggggctgcttt
ttcaccagagagcaatacatggagcttgtgtaccgaggactgacagacaaaaaaggaaga
attaaaatctttcctcctgccattatgaagccacagagattatggacaggaaagcaggtt
gtttctacattgttaataaacatcattccagacaaccatgctccactgaatttgactggg
aaagcaaagattggtgggagagcctggataaagggacctgcaaaaggatttctgaatctt
gattcaatgtgtgaatctcaggttattatcagagatggggaattactgtgtggagtcttg
gacaaagctcactttggcagctctgcctatggcctggtccactgctgctatgagatctat
gggggtgaaaccagtgggaaagtgctgacgtgtctggggcgcctcttcactgcttacctg
cagctgtacaggggatttaccatggggattgaagatattttggttaaacctgaagcagat
cataaaagaaaaaaaatcattgaaaggtcgaggcagagtggtattgaagctgttagagct
gctcttaatttgccagaaacagcatcatgtgaggaggtccaagggaagtggcaggatgcc
catctgtgcaaagaccagagggattttaacatggttgatatgaagttcaaggaggaagta
aacaattacaacaatgaagttaacaaggtttgcatgcctctaggtctccacaggagcttt
ccagagaacaatttgcagttgatggtacagtcaggagccaaaggatccactgtaaacaca
atgcagatttcttgtttgctgggccagattgagttggaaggccgaagacccccactgatg
gcatctggcaaatcactgccatgtttccagccttatgatttttcccctagctcaggagga
tttgtgaccggcagatttctcactgggatcagaccttctgaattcttctttcactgcatg
gctggcagggaaggtcttgtggatacagctgtcaaacccagccgttctgggtacctgcaa
aggtgtatcataaaacatttggaagggctggtagttcagtatgacctgactgtacgagac
agtgatggcagcgtggtgcagtttctctatggagaagatgggcttgatatccctaaaact
cagttcttacaacctgagcagtttcctttcattgcagaaaactacgaggtaatccagaag
acaaaccatctggatgaagctttagcaaggatggagtcttaccaagctaagcagcagttt
aaagccatcaaaaagtggagagccaggcaccaaaactctgtgcaaagagaaggaggcttt
ctgttgttttcccagaagaaactggcaagtgtgaaagcacagcttccaggaggtgaaatg
aagaatggaagagatcctgctactttacagttgttgaagatgtggtatgagctcgatgag
aagaaacgaaggaagtatctgaagaagacaaataagtgtcctgacccaagccttggggtt
tggcgtccagataccaattttgcatctgtttcagaaacatttgaaaatggagtcgaaggt
tatatcagtaaatgggaatctgagaacagccggagttacatgcagtcagcactttctgct
gatagattaaaggatctgttgtatttaaagtggcagcgttctctttgtgacccaggagaa
gctgtggggcttcttgcagctcagagtattggggaaccttcgacacagatgactctgaac
acctttcactttgctggcagaggtgaaatgaatgtcacattgggtattccaaggttgcgg
gaaatactgatggtggccagctcaaacattaaaacaccgatgatgagtgttcctgtgttc
aataccaagaaagctctcaagaaggtgaaacagcttaagaaacagctcacgagagtatgc
ttagctgaggtcttgcagaaagtggacattgaggaatccctgcatgtgaagcacaagctg
aacaagcatcacctctacaaaatcaaattccatttcttgccccatgaggattaccgagag
gagaagtgtgtgaagcccaggcagatcttgcacttcatggaaacaaggttctttaaagtt
tttctggaagcaattaaaagaaagactacaaagatggcatcttttaatgaagtcagcact
cggaagacaactcggaaggatttagatgatgaccaagacaagacactgaatagtctggaa
gctgtagcagaggaggaagagaacattgttgatgcagaagctgatgaaggggatggtgat
gccacagaagtaaaacggaggaagaaccaggaagaagaggtcgattatgagagtgaagaa
gagaacggggaagaaaacgttaatgagaatccagaagatgaagaggctgaatctgaaaaa
gaagaagggactcctggtgctgaagaggatcagaacagagcagagggtgaagattctcag
aatccttcctttctgtctcagactaaaaaagggaaagatcgattgcttcagtcagcagag
gtgcgcgtgagcgctgttgtggagagccacccatccatacaggattacacgtttgacacc
gaaaacgagctctggtgtgaggtttccttggcattgccactgaccaaggtgtacttcgac
ctctcctcgctgctggcgtccctggcgcgcagcacggtgatccacgaggtgaagggcatc
acacggtgcctgctgaatgaaagtaccaacaaggagggagagaaggaattcgttctccac
acagaagggataaacctgacagagctcttcagatactctgatattttggacctgaacaga
ctttattccaatgatatccatgccatggctaagaattacggaattgaatcagccctgagg
gtgattataaaggaagtaaaagatgtgtttgctgtatatggaattgtggtagaccctcga
cacctttcacttgtggcagattatatgtgttttgaaggaatttataaaccactgagtcgt
tttggaattcagtccaactcctcccctctgcaacagatgacgtttgaaaccagctacaaa
ttcttgaaggaagcaacaatgatgggtgcccatgatgagctgcgatccccttcggcctgc
ctggtggttggaaaagttgtcaaaggagggactggcttgtttgacctcaagcagcccctg
acgtag
DBGET
integrated database retrieval system
