Corvus brachyrhynchos (American crow): 103611381
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Entry
103611381 CDS
T08418
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbrc03021
]
103611381
03036 Chromosome and associated proteins [BR:
cbrc03036
]
103611381
Transcription machinery [BR:
cbrc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
103611381
Chromosome and associated proteins [BR:
cbrc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
103611381
SLIK complex
103611381
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Chromo
Helicase_C
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
103611381
NCBI-ProteinID:
XP_008627108
LinkDB
All DBs
Position
Unknown
AA seq
1788 aa
AA seq
DB search
MNGHSDEDVVRNSSGESSQSDDDSGSASVSGSGSSSGSSSDGSSSQSGSSDSESGSESDT
SREKKQVQAKLPPKLDGSEFWKSSPSILAVQRSAVLKKQQQQKAASSDSGSEEDPSNSED
SADDSSSEAKKKNHRDEDWQMSGSGSVSGASSDSESEEDRERSSCEDSESDYEPENKVKS
RKLPSRIEPKSGKKIAGQKKRQLDSSDDDDYDKRGSRRQATVNVSYKEAEETKTDSDDLL
EVCGEDVPQPEEDEFETIEKFMDSRIGRKGATGAATTIYAVEADGDPNTGFEKSKEPGEL
QYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKRWLKNASPEDVEYYNC
QQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALIAKKFQTC
IDEYFSRNQSKTTPFKECKILKQRPRFVALKKQPSYIGGHEGLELRDYQLNGLNWLAHSW
CKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWAPQM
NAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKSFLGGLNWVFIGVDEA
HRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHG
KGREFGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKA
LSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQHLIRSSGKLILLDKL
LIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSE
DFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKA
SVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAILKFGAEEL
FKEPEGEEEEPQEMDIDEILKRAETRENEPGPLTVGDELLSQFKVANFSNMDEDDIELEP
EQNLRSWEEIIPEVQRRRIEEEERQKELEEIYMLPRMRNCAKQISFNGSEGKRSRRRRYS
GSDSDSASERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDAIARDAE
LVDKSEIDLRRLGELVHNGCIKALKDNSFGQERAGGRVGKVKGPTFRISGVQVNAKLVIS
HEEELAPLHKSIPADPEERKRYVIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMI
KMDPDLSLTQKILPDDPDKKPQAKQLQTRADYLIKLLNKDLARKEVQRLTGAGNSKRKKA
RSKKNRATKAAKIKEEIKSDSSPPSEKSDDDEYNEDEIVSVKCPHKKIKAEENEEKPEPD
IGIKKEAEEKKETREKENKRHLKREKKEKEDKKEFKNIKEKRDNKLKESTEKEKEVKEEK
VNELKSENKEKNKKVSLLDIPVHITATSETVPISEEPEELDQRTFSVCKERMRPVKAALK
QLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKNLWIFVSKFTEFD
ARKLHKLYKHAIKKRQESQQHGDQNISNNVNTHVIRNPDVERLKENTNHDDSSRDSSSDR
NLSQYYDHHKDRHQEDAYNKNDSRKRSYSAFSNGKDHRDWDHYKQDSRCYGDGKRRKLDD
HRSRDHRSNLEGSLKDSWAHSNHRSHSDHRIHSDHRSTSEYIHHKSLRDYRYHSDRQMDH
RASGSGPRSPLDQRSPYGSRSPIGHRSSFEHSSDHKSTPEHTWSSWKT
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcacagtgatgaagatgttgtaagaaacagtagtggagagtcaagccagtca
gatgatgattctgggtcagcatcagtttctggatctggttcaagctctggaagcagtagt
gatggaagtagcagtcaatcaggtagcagtgactctgagtctggttcagagtctgacaca
tctagagagaagaaacaagttcaagctaaactaccacccaaacttgatggatctgagttt
tggaagtccagtccaagtatacttgctgtgcagagatcagcagtgctcaagaagcaacaa
caacagaaggcagcctcatcagacagtggttcagaagaggatccatcgaacagtgaagat
tctgcagatgactcttccagtgaagccaagaagaaaaatcatagagatgaagactggcaa
atgtctgggtcagggtcagtatcaggagctagttctgattctgaatcagaggaagataga
gagagaagcagttgtgaagatagtgaatctgactatgagccagaaaacaaagtcaaaagc
cggaaacttccaagcagaattgagccaaaaagtggcaaaaagattgcaggacagaaaaag
aggcagcttgattcgtcagatgatgatgactatgacaagagaggatctcgtcgccaggca
acagtcaatgttagttacaaagaagctgaagaaaccaagacagattctgacgacttgttg
gaagtttgtggagaagatgtcccacagcctgaagaagatgaatttgaaactatagagaag
tttatggatagtcgaattggccgaaaaggagccactggtgctgcaaccaccatctatgca
gttgaggcagatggtgacccaaatactgggtttgaaaagtcaaaggagccaggagaatta
caatatcttattaaatggaaaggctggtcacacatccataatacatgggaaactgaggaa
acactgaagcaacaaaatgttaaaggaatgaagaaactggacaactataagaaaaaagat
caggaaacaaaacgctggctgaaaaatgcttctccagaagatgtggaatattataactgc
cagcaggaacttacagatgatctacataaacagtatcaaatagtggagaggataattgct
cattcaaatcagaaatcagcagctggttatccagattactattgcaaatggcaaggtctg
ccttattcagaatgtagctgggaagatggtgctctcattgccaaaaaatttcagacgtgt
attgatgagtattttagcagaaaccaatctaagactactccatttaaggagtgtaagatt
ctaaaacagaggccgaggtttgttgcactaaagaagcaaccatcttatattggaggacat
gaaggtttagagttaagagattatcagttaaatggactgaactggcttgcccactcatgg
tgcaaagggaatagttgtattcttgcagatgaaatgggtctgggtaaaacaatacaaaca
atttcttttctgaactacctgtttcacgaacatcaactgtatgggcctttcttgctagtc
gtgccgctttctaccttgacatcttggcaaagagagattcaaacttgggctcctcagatg
aatgctgtggtttacttaggagatataactagcagaaatatgataagaactcatgagtgg
atgcatccacagaccaagcgattaaaatttaatatacttctaacaacttatgaaattttg
ctgaaggataagtcattccttggtggtctgaattgggtatttataggagttgatgaagct
catcgtttaaaaaatgatgattcccttctgtacaagactttaatagactttaagtctaat
catcgtcttcttattactggaacccctctgcaaaactcccttaaagagctttggtctttg
ctgcacttcatcatgccagaaaagttttcttcctgggaagattttgaagaagagcatggc
aaagggagagagtttggttatgcaagtcttcacaaagaacttgaaccatttttactcaga
agagttaaaaaagatgtagaaaagtctttacctgctaaggttgaacaaattttgaggatg
gaaatgagtgcattgcagaagcaatattacaagtggattttaaccaggaattataaagcc
ctgagtaaaggttcaaaaggcagtacctcgggctttttgaacattatgatggaactcaag
aagtgctgtaaccattgctacctcattaaaccaccggacgataatgaattctataataaa
caggaggccttacagcatttaatacgtagcagtggaaaactaatccttcttgacaagcta
ctgattcgtctacgagaacgtggcaacagagtactgattttctctcagatggtgaggatg
ttagatatcctagcagagtatttgaagtatcgtcagtttccctttcagagacttgatgga
tcaataaaaggggaattgaggaaacaagcattggatcattttaatgcagaaggctcagag
gacttctgctttttgctgtctaccagagctggaggattaggtataaacttagcatctgct
gacactgtagttatatttgattctgattggaatccacagaatgatctgcaggcgcaggct
agagctcataggattggacagaagaaacaggttaatatttatcggctagtcacaaaagca
tcagtagaagaagatattcttgaaagagccaagaaaaagatggtgttagatcacttagta
attcagagaatggacactacagggaaaactgtactacatacaggctctactccctccagc
tcaacaccttttaataaggaagagttatcagcaattttgaagtttggtgccgaggaactt
tttaaagaacctgaaggggaagaagaggagcctcaggaaatggatatagatgaaatcctg
aagagggctgaaactcgagaaaatgaaccaggtccactgactgtaggagatgagttgctt
tcacagttcaaggtggctaacttttcaaatatggatgaagatgacatcgagttggaacca
gaacaaaatttaagaagctgggaagaaatcattccagaagtccagcggcgacgaatagaa
gaggaggaaagacaaaaagagcttgaagaaatatatatgctgccaagaatgagaaactgt
gcaaaacagatcagctttaatggaagcgaagggaaacgcagtaggaggagaagatattct
ggatctgatagtgactcagcctcagaaagaaaacgaccaaaaaaacgtggaagaccgcga
actattcctcgagaaaatattaaaggatttagtgatgcagagattaggcggtttatcaag
agttacaagaaatttggtggcccgcttgaaaggttagatgctatagctagagatgctgag
ctagttgataaatctgagatagaccttagacgtctgggagaacttgtacataatggatgc
attaaggctttaaaggacaattcctttggccaagaaagagcaggaggtagagttgggaaa
gttaaaggcccaacattccgaatatcaggagtgcaggtgaatgcaaagctagttatttct
catgaagaagagttggcaccgttgcacaaatccattcctgcagatccagaagaaaggaaa
agatatgtcatcccatgccacaccaaggcagctcattttgatatagattggggtaaggaa
gatgattccaatctgttaataggtatctatgaatatggctatggaagctgggaaatgata
aaaatggatcctgatctcagtttgacacagaagattttacctgatgacccagataagaaa
ccccaggccaagcagttgcagacccgtgcagattacctcattaaattactgaataaagac
cttgcaagaaaagaagtgcaaagacttactggtgcaggcaattcaaagaggaagaaagca
agaagtaagaagaatagagcaacaaaggctgcaaaaattaaagaagaaataaaaagtgac
tcatcaccaccctcagaaaaatctgatgatgatgagtataatgaggatgagattgtttca
gtgaaatgtccacataaaaaaataaaagcagaagaaaatgaagaaaagcctgagccagat
attggtataaagaaggaagctgaagaaaaaaaagagacaagagaaaaagaaaataagagg
catttaaaaagagagaaaaaagaaaaagaagataagaaagaatttaaaaatattaaagaa
aagagagataacaaactaaaagaatccacagagaaagaaaaagaagtaaaggaagaaaag
gtaaatgaactcaaatctgaaaataaagaaaaaaataaaaaagtttcattgttggatatt
ccagttcatattactgcaactagtgaaacagttccaatatcagaagaacctgaagaactg
gatcagaggacattcagtgtgtgcaaagaaagaatgaggcctgttaaagcagcactgaaa
caattggatagaccagagaaaggcctttctgaaagggaacagctggagcatactagacag
tgcctaatcaaaattggggaccacatcactgagtgtctaaaggagtacacaaatcctgaa
caaattaaacagtggagaaaaaacttgtggatttttgtctctaagtttacagaatttgat
gccagaaagttgcacaagctgtataaacatgcaatcaagaaacgccaagaatctcagcag
cacggtgaccagaatattagcaacaatgtgaatacacatgtaattagaaatccagatgtt
gaaagactgaaggagaatacaaaccatgatgacagtagcagggacagttcttctgataga
aatttgtcacagtactatgatcatcataaggacaggcatcaggaagatgcttataataaa
aatgactcaaggaaaaggtcctattcagccttcagcaatggaaaagaccacagagactgg
gatcactataaacaagacagcagatgctatggtgatggtaaacgtagaaaactggatgac
cacaggagcagagatcacaggtcaaacctggaaggaagtttaaaagacagttgggctcat
tcaaatcaccgttcccattcagaccacaggatacattcagatcaccgttccacttcagag
tatatccatcataaatctttgagagattataggtaccactcagaccggcaaatggaccac
agagcttctggtagtggcccaaggtcaccattagatcagaggtctccttatgggtcaaga
tctcctataggacacagatcttcatttgaacactcatcagatcacaaaagtacacctgaa
catacatggagtagctggaaaacataa
DBGET
integrated database retrieval system
