KEGG   Corvus brachyrhynchos (American crow): 103611426
Entry
103611426         CDS       T08418                                 
Symbol
GEMIN5
Name
(RefSeq) gem-associated protein 5
  KO
K13133  gem associated protein 5
Organism
cbrc  Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:cbrc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbrc03019]
    103611426 (GEMIN5)
   03041 Spliceosome [BR:cbrc03041]
    103611426 (GEMIN5)
Messenger RNA biogenesis [BR:cbrc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     103611426 (GEMIN5)
   mRNA cycle factors
    P-body specific factors
     103611426 (GEMIN5)
Spliceosome [BR:cbrc03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    103611426 (GEMIN5)
SSDB
Motif
Pfam: GEMI5_RBS TPR_GEMI5 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_RIG_2nd WD40 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_Aladin Beta-prop_HPS5 Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_RIG_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_WDR19_1st Beta-prop_WDR75_1st Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_WDR41 Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_Nup120_160 MIOS_WD40 TPR_IF140-IFT172 WD_LRWD1 Beta-prop_IFT122_1st Beta-prop_IP5PC_F Tricorn_2nd ANAPC5
Other DBs
NCBI-GeneID: 103611426
NCBI-ProteinID: XP_017583530
LinkDB
Position
Unknown
AA seq 1474 aa
GELIGHTDRISGFAFCPCPGQSSLCASSSDDGSVKIWDTGTLSPVLEYSLHQNAISALHW
SPLVKDLIVSGDEKGVIVCYWHNRNDSQQFFPEPRTVFCLTCSPHHENLVAIGYKDGMVV
VIDISRQIRGHEDEIHCLAWCPVPGEERLPAWQDELQAPSEEGKVPNGELTQDTATKKGC
YLASGSKDQTIRIWSCTRGRSMMTLKLPPTKRRGGAVDPAVKERIWLTVHWPAGHPTEIV
SSGFGGELLLWNLTQPGKRKWTLLGSSEGQNHSRIVFNLSSVKHQDKELLFSISMDRDVK
CWDLSTLDCSWTMPSLGGFVYSLAFSPVDTGCLAIGVGDSMIRVWNTLSMNNIYDVKTFW
QSIKSKVTALSWHPTKEGSLAFGTDDGKVGIFDTLSSSAKNKPPQISSTYHKKTVYTLAW
GPPTPPLTSGEESEQPSVTLYSCAGEGIVFQHNPWKLNGEANDINKVIRDTNSIKHKLPA
RTEISWKPDGKLLALGNEDGSIEIFQAPNLKLLCTIQQHHKLINAIRWHHEHGTQPELSY
LIASGSINATIYVHNLKNVVENSSESPLTITEPFRTLAGHTAKITSLSWSPHHEGRLVSA
CYDGTAQVWDVMKEEPLCNYRGHQGRLLSVQWSPVDSDCVYTGADDFSVHKWHISKQEHT
RPPQGKKSVELEKKRSMQPKVKAKKKKKPTGKSPGKQDANDAMNGDDSMKEMLLEENGVS
DHEGEKEAQEAELADKVSVTVSRDTSSSACDYSSFSSPKPFVTQKAAPVKKDPPKEKPAP
DASLKKKKPRSILPFSTLMDHRSKDDLHQDCLKLAACLKTKDNNEDVSPDLKDCIHLGLF
TDRDSLHKMIDMEGKHHLENGHAELFQQLMLWKGDLKGVLQAAAERGELTDQLVAMSPMA
GYQAWVWTVEAFAKQLCFQEQYVKAASHLLSIHKVYEAIELLKVNNFYREAIVMAKARLR
PEDPILKDLYTSWAALLEKDGHYSMAAKCYLGASSPYDAVKVLSKKGDVTSLKTAAELAL
ISGEEELSATLSLRCAQDLLLSRNWVGAQEVLQQHKTLFGQSLVFCLNELLCRCLSERNP
CERKSPVPPCYHNWELNRQASFFDMVTEVWQNVLGMDTTERATCAQEQLHRIEHPPSTSN
THPKQVLFHISHDLALAALSCHLGTWDEAVKNILGAVTRSFDAGNFTLMQEICSIILPEG
CDDLRHKLDSTKSQSMDACRSLEGFVAYRLLYDLWWNPPKDCLGLQKAVLGPVLCPSEQT
APEKSCVSGDPSPEETVRTAAEMGENLCSTTDVHKCETQSDSGTDSTDMVDRQSKLKGCQ
VLLSEEMAALQNTQRDIAEVQETLAEMIRQHQQQRNNLQENTNGNTQGSNLEQSSETESD
KRCSDSNQMNCKDEVKQPITLPELTKQLLKAKQKLAEFPDNLKVFPFPDVLECCLVLLHL
GSQCPSELQEEALALLRKHGSAGIYKKAGRSFLT
NT seq 4425 nt   +upstreamnt  +downstreamnt
ggggagctcatcgggcacacggacaggatctccgggttcgccttttgcccctgccccggg
cagagcagcctctgcgccagcagctccgacgacggaagcgtcaaaatctgggacaccggg
acgctgtcgccggtgctggagtacagcctgcaccagaatgcaatctcggcgctgcattgg
tcacctcttgtgaaagatctgattgtgtctggtgatgagaaaggagtcattgtttgttac
tggcacaacagaaatgacagccagcagttcttcccagagcctcggacagttttctgcctc
acctgttctcctcatcatgaaaacctggtggccattggctacaaggatggcatggtggtt
gtaattgatatcagcaggcagattagaggccacgaggatgaaatacattgcctggcctgg
tgccctgtgcctggggaagaaaggttacctgcttggcaggatgagctccaggctccttca
gaggaaggcaaggttccaaatggggagctgacacaggacacagccacgaagaaaggttgt
tacctggcctctggaagcaaggatcaaaccatacgaatatggagctgtaccagaggcagg
agtatgatgactctgaagctgccacccaccaagaggagaggtggagccgtggatccggcg
gtcaaggagcgcatttggctgactgtgcactggcctgctggccatcccactgagattgtg
tccagtggctttggaggagaactgctcctttggaatttgacccagcctggcaaacgcaaa
tggactcttctgggatcttcagaaggacaaaaccactcccgaattgtgttcaatctcagt
tctgtgaagcaccaagacaaagagctccttttttctatttcaatggacagagatgtgaaa
tgctgggatctgtcaactctggattgcagctggaccatgccttcccttggaggatttgtc
tacagccttgccttctcccctgtggacacaggctgtcttgccatcggggttggagacagc
atgatccgcgtgtggaatactttgtccatgaacaatatttatgatgtcaaaaccttctgg
caaagcataaagtctaaggttacagcattatcctggcatccaactaaggaaggctccttg
gcttttggaacagatgatggaaaagttggcatatttgacaccttgtccagcagtgctaag
aataagccacctcagatctccagtacttaccacaagaagactgtgtacacattagcctgg
gggcctccaactcctcctctgacttctggagaagaaagtgaacagccctctgtaactttg
tacagttgtgctggagaaggaattgtttttcaacacaatccctggaagcttaatggagaa
gcaaatgacatcaacaaagtcatccgagacaccaattcaatcaaacacaagctgcctgca
cgtacagagatcagctggaaaccagatggcaaactcctggctcttggcaatgaggatggc
tcaattgaaatatttcaggcaccaaacttgaagctgctctgcactatccagcagcatcac
aagctgatcaatgccattcgttggcaccatgagcacgggacccagccagagctgagttac
ctgatagcttcaggctccatcaatgccaccatttatgtgcataatctgaagaatgttgta
gagaactcttcagaaagtcctttgacaataacagagccttttcgaactctggctgggcac
acagctaaaatcacaagtctttcttggagcccccaccatgagggaagattggtgtctgct
tgctatgatggcactgcacaggtgtgggatgtgatgaaggaagagccactctgcaactac
cgagggcaccagggccgcctgctgagtgtccagtggtcaccagtggattcagattgtgtt
tatacaggagcagatgatttttctgttcacaagtggcacatctccaagcaggaacataca
cggcctcctcagggcaaaaagagtgtagaattagagaagaaaagaagtatgcagccaaaa
gtcaaagccaagaagaagaaaaagccaacaggcaagagtccaggcaagcaggatgcaaat
gatgccatgaatggagatgacagcatgaaggaaatgttgctggaggaaaatggagtgtca
gaccatgaaggagaaaaagaagctcaggaggcagagttggctgataaagtctctgtgact
gtgtccagggatacatcttcatctgcatgtgattattcttcattcagctcaccaaagcct
tttgtgacccagaaagctgctcccgtgaaaaaggatccacctaaagagaagccagctcct
gatgcctctctaaagaagaagaagcctcgttctattctgcccttcagcacattaatggat
cacagatcaaaagatgacttgcatcaggactgcttgaagctggctgcatgtctgaaaact
aaagataataatgaagatgtgtcccctgacctcaaggattgcatccacttggggctgttc
acagacagggattctctgcacaagatgattgatatggaaggaaagcaccacttggagaat
gggcacgcagagctcttccagcagctcatgctatggaaaggagacttgaagggtgttctc
caggcagctgctgagaggggggagctgacagaccagctcgtagccatgtcacccatggct
ggataccaggcctgggtttggacagtggaagcctttgccaagcagctgtgtttccaggag
caatacgtgaaggctgcctcccatctcctgtccatccataaagtctatgaggctattgag
ctcctgaaagtgaacaatttttacagggaagcgattgtaatggctaaggccaggctgcgt
ccagaagatccaattctgaaggatctctacaccagctgggcagctctgctagagaaagat
ggtcattattccatggctgccaagtgttatctgggggcttcctcaccctatgatgcggtt
aaagtgttgtcaaagaagggggatgtgacatcccttaaaactgctgctgagcttgctctg
atatctggggaggaggagttgtcagcaactttgtctttgagatgtgcccaagacctgctg
ttatccaggaactgggtgggagctcaggaagtccttcagcaacataaaactttatttgga
caaagccttgttttctgcctgaacgaactgctctgcaggtgcctcagtgaaaggaatccc
tgtgagcgaaagagccccgtgcccccctgttaccacaactgggagctgaacagacaggcc
tcgttttttgacatggtgacagaagtgtggcagaatgtgctgggcatggacaccactgaa
cgagccacatgtgcacaggagcagctgcacaggattgagcatcctccttcaaccagcaac
acacacccaaaacaggtgcttttccatatctcccatgacctggcccttgcagccctgagc
tgtcacttgggtacgtgggatgaggcagtgaaaaatattcttggagctgtgacccgcagt
tttgatgctgggaatttcactctgatgcaggagatttgcagtatcatccttcctgagggc
tgtgatgacctgagacacaaactggacagcacaaagtctcagagcatggatgcctgcagg
agtttggagggcttcgtggcttacagactgctctatgacctgtggtggaacccacccaaa
gactgccttggcctgcagaaggctgtgttgggtcctgtgctgtgtcccagtgagcagaca
gctcctgagaagagttgtgtttcaggtgacccatcccctgaggaaacggttcgaactgca
gctgagatgggtgaaaacctctgcagtacaactgacgttcacaagtgtgagacacaaagt
gactcaggaactgactcgactgatatggtagacagacagtcaaaactgaagggttgccaa
gtgctcctttcagaagagatggctgccttgcagaacacccagagagacatagctgaggtc
caggagactttagcagaaatgatccggcagcatcagcagcagaggaacaatctccaggaa
aacacaaatggaaacacgcagggaagcaacctggaacagagttcagagactgaatcagac
aaacgatgctctgacagcaaccagatgaattgcaaagatgaagtaaagcaaccgattacg
ctccctgagctcacaaagcagcttctgaaagcaaagcagaaattagctgaattcccagac
aatttaaaggtcttccccttccctgacgtgctggagtgctgccttgtactccttcacctt
ggatcccagtgtccttctgagctgcaggaagaggctctcgctctccttaggaaacacggt
agtgctgggatttacaaaaaggctggcaggagcttcttgacatga

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