Corvus brachyrhynchos (American crow): 103611458
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Entry
103611458 CDS
T08418
Symbol
COPA
Name
(RefSeq) LOW QUALITY PROTEIN: coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
cbrc
Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbrc04131
]
103611458 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cbrc04147
]
103611458 (COPA)
Membrane trafficking [BR:
cbrc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
103611458 (COPA)
Exosome [BR:
cbrc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103611458 (COPA)
Exosomal proteins of bladder cancer cells
103611458 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
103611458
NCBI-ProteinID:
XP_017583088
LinkDB
All DBs
Position
Unknown
AA seq
1001 aa
AA seq
DB search
MVGGGDFGLWRGGILGSRALRFPLEFLSGILGFPRGGGAWKTWEKRISKPKNRDLGRTWG
SAEEEFRGWRSGLEFQPFPSWNSDGAVLFPRGICSVFGGILPVFGPVWDSQILLLLLSSR
FFPFPTFFLPSSGSKFPVFSMSYNPAENSVLLCTRASNLENSTYDLYTIPKDADSQNPDA
PEGKRSSGLTAVWVARNRFAVLDRMHSILIKNLKNEITKKVQVPNCDEIFYAGTGNLLLR
DSDSITLFDVQQKSTPRSPRTAPFDRGVAAIPFHSRHSRHSHGSFPAIMICNRKLESLCN
IHENIRVKSGAWDESGVFIYTTSNHIKYAVTSRDHGIIRTLDLPIYVTRVKGNNVYCLDR
ECRPRVLTIDPTEFRFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQRKVYPEVALHFVK
DEKTRFSLALECGNIEIALEAAKALDDKGCWEKLGEVALLQGNHQVVEMCYQRTKNFDRL
SFLYLITGNLEKLRKMMKIAEIRKDMSGPYQNALYRGDVAERVRILKSCGQKSLAFLTAA
THGLDEEAESLRESFDPEKETIPAVDPEARLLQPPAPVLPLDTNWPLLTVSKGFFEGTIA
GKGKGGGLAADIDMDAVGTEGWGEDAELQLEEDGFVDAGEGFGEEGMGKGPEEGGGWEVE
EDLDLPPELDVPAGPAGAAEDGFFVPPTKGTSPAQVWCNNSQLPVDHILAGSFETAMRLL
HDQVGVTNFGPYKQLFLQTFSRGRTTFQALPSLPAMYGFPHRNWKEAGPKTALPAVGLKL
NDLIQRLQLCYQLTTAGKFEEAVEKFRLILLSVPLLVVDNKQEIAEAQQLIAICREYIVG
LSMEIERKKLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKSAAT
FARRLLELGPKPEVAQQTRKILSACEKNPSDSHQLNYDQHNPFDICAASYRPIYRGKPLE
KCPLSGACYSPEFRGQICRVTTVTEIGKDVLGLRISPLQFR
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggtgggagggggggattttgggctctggagagggggaattttggggtcgagggctttg
aggttccccttggaattcctttctggaattttggggttcccgagggggggtggagcttgg
aaaacctgggaaaagcggatttcaaagcctaaaaaccgggatttggggaggacttggggc
tctgcagaggaggaatttcggggttggagatctggcctggaattccaacccttcccttcc
tggaattctgacggagccgtgcttttcccacgaggaatctgctccgtttttggaggaatt
ctcccggtttttggccccgtttgggattcccaaattctcctcctcctcctctcttcccga
tttttcccttttcccactttttttttgccttccagcggctccaagttcccggtgttcagc
atgtcctacaacccggccgagaattccgtgctgctctgcacccgagccagcaacctggag
aacagcacctacgacctctacaccattcccaaggacgccgattcccaaaatcccgacgct
ccggaggggaagcgcagctcggggctcacggccgtgtgggtggcgcggaatcgcttcgct
gtgctggacaggatgcactcgatcctgatcaagaacctgaagaacgagatcaccaagaag
gttcaggtgcccaactgcgacgagattttctacgccggcaccgggaatctgctcctgagg
gactcggattccatcaccctcttcgacgtccagcagaaaagcaccccacgctcccccaga
actgctccgtttgaccgcggcgttgccgcgattccttttcattcccgtcattcccggcat
tcccacggatccttcccagccatcatgatctgcaaccggaagctggaatcgctgtgcaac
atccacgagaacatccgggtgaagagcggcgcctgggacgagagcggcgtcttcatctac
accaccagcaaccacatcaaatacgccgtcaccagcagggatcacgggatcatccgcacc
ctggacctgcccatctacgtgacgcgcgtcaagggcaacaacgtctactgcctggaccgc
gagtgccggccccgcgtgctcaccatcgaccccaccgagttccgcttcaaactggcgctc
atcaacaggaagtacgatgaggtgctgcacatggtgcgcaacgccaagctggtggggcag
tcgatcatcgcgtacctgcagcgcaaggtctaccccgaggtggcgctgcacttcgtcaag
gacgagaagacgcgcttcagcctggccctggagtgcggcaacatcgagatcgccctggag
gccgccaaggcgctggacgacaagggctgctgggagaagctgggcgaggtggcgctgctg
cagggcaaccaccaggtggtggagatgtgctaccagcgcaccaagaacttcgaccgcctc
tccttcctctacctcatcaccggcaacctggagaagctgcgcaagatgatgaagatcgcc
gagatccggaaggacatgagcggcccctaccagaacgcgctgtaccggggggacgtggcc
gagagggtccggatcctcaagagctgcgggcagaagtcgctggcgttcctgacggccgcc
acgcacgggctggacgaggaggccgagagcctgcgggaatccttcgatcccgagaaggag
acgatcccggccgtggatcccgaggcgcggctgctgcagcccccggccccggtgctgccc
ctggacaccaactggcccctcctgaccgtgtccaaagggttcttcgagggaaccatcgcc
gggaaagggaaagggggaggcctggccgccgacatcgacatggacgccgtgggcaccgag
ggctggggcgaggacgcggagctgcagctggaggaagacggattcgtggatgccggagaa
ggattcggagaggaaggaatgggaaaagggccggaggaaggaggaggatgggaagtggag
gaagatttggatcttccccctgagctggatgtccccgccggccccgcgggagcagctgag
gacggattcttcgtgccccccaccaagggcaccagcccagcccaggtgtggtgcaacaat
tcccagctccctgtggatcacatcctggcgggatccttcgagacagccatgagactgctc
catgaccaggtgggagtgaccaactttggcccctacaagcagctcttcctgcagaccttt
tcccgaggccggacgacattccaggcccttcccagcctccccgccatgtacggattccca
caccgcaactggaaagaggccgggcccaagacggctctgccggccgtggggctgaagctg
aacgacctcatccagcggctgcagctctgctaccaactgaccacggccgggaaattcgag
gaagccgtggagaaattccggctgatcctgctcagcgtccccttgctggtggtggacaac
aagcaggagattgccgaggcgcagcagctgatcgcgatttgccgggaatacatcgtggga
ttgtccatggagatcgagaggaagaagctgcccaaggagacgctggagcagcagaagagg
atctgtgagatggccgcctacttcacgcactccaacctgcagcccgtgcacatgatcctg
gtgctccgcaccgccctcaacctcttcttcaaactcaagaacttcaagagcgccgccacc
ttcgcccggcgcctgctcgagctcggccccaagcccgaggtggcccagcagacacggaag
atcctgtcagcctgcgagaagaaccccagcgacagccaccagctcaactatgaccagcac
aaccccttcgacatctgcgccgcctcctaccgccccatttaccgcgggaaacccctggaa
aagtgtcccctcagcggggcctgctacagccccgagttccgcgggcagatctgccgcgtc
accacggtgacggagatcgggaaggacgtcctggggctgcgcatcagccccctccagttc
cgctag
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