Corvus brachyrhynchos (American crow): 103611816
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Entry
103611816 CDS
T08418
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbrc03016
]
103611816 (TRUB1)
Enzymes [BR:
cbrc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
103611816 (TRUB1)
Transfer RNA biogenesis [BR:
cbrc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
103611816 (TRUB1)
Prokaryotic type
103611816 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DMA
Pus10_C
Motif
Other DBs
NCBI-GeneID:
103611816
NCBI-ProteinID:
XP_017584094
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MVATWLTYFLPPALRLFPVSLLRVAAVVAAEAAAALSASSQGEGIQHGLGEITLAGPEKQ
FLPKSTAVGLHSQFIISQGLQAPFPAQAVLLLLKPAPCDSECSPVIEAARVPHGCVAAAQ
PWVITSSDSPSESQPCTHEAKNPRCAPGGKNAARALRFNNFARGQSGNAGHFSDVLRLFY
NASFQFLFAEAGVQTNGNKRNQVLKIGHGGTLDSAATGVLVVGIGKGTKMLGTMLTGSKK
YTAIGMLGKATDTLDATGKVTEEKPYDQVTKKDLENVLQKFTGDIMQVPPLYSALKKGGE
RLSTLMKRGEAVEAKPARPVRVYSLSLQQFQPPLFTLDVECGGGFYVRSLVNDIGKELST
CATVQELTRTKQGPFTLEEHALHEDKWTIDEIARSLEHCTALLLGGPSRKKLKTEHPGET
AVICEDK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggttgccacctggttaacctactttctgcctcctgctctgaggcttttccctgtgtcc
ctgctgcgggtggctgctgtagttgctgctgaggctgcagctgccctttctgcaagcagc
caaggggaaggcatccagcatggattgggtgaaataacactagctggtcctgaaaagcag
ttcctacctaaatccacagcagtcggcttgcacagccagttcatcatcagtcaggggctg
caagccccgttccctgcccaggccgttctgctgctgttaaagccagccccttgcgactcg
gagtgttccccggtaattgaggcggctcgtgttccacatggctgcgtggccgctgcccag
ccctgggttatcacgagctcagacagccccagcgaatctcagccctgcacccacgaggca
aaaaatcctcgttgtgctcctggagggaaaaatgctgccagagccctgaggttcaacaac
tttgctcgtggacagtctggaaatgcaggtcatttttccgacgttctaaggttattttat
aatgcttcctttcaatttctatttgcagaagctggtgtgcaaacaaacgggaacaaaaga
aatcaggttttgaaaattggacatggaggaactttggacagtgcagccacaggagttctg
gtggttggtattggaaaaggaacaaaaatgctgggaactatgttgacaggttccaagaaa
tacactgccattggaatgctgggcaaggctactgatacattagatgctacaggaaaagta
actgaagaaaaaccttatgaccaggtaacaaaaaaagatcttgaaaatgtgctgcaaaag
ttcacaggggacatcatgcaagttcctccactctattctgctttgaagaagggtggagaa
aggctttcaactctgatgaagagaggggaagcagtggaagcaaagccagctcggccagta
agagtgtacagcctttctctccagcagttccagccaccactgttcacgctggatgttgaa
tgtggtggtggcttttatgtcaggagcctggtcaatgacattggcaaagagctctctacc
tgtgccacagtgcaggagctgacccgcaccaagcaggggccgttcacgctggaggagcac
gccctgcacgaagacaaatggacaattgatgaaattgcccggtccttggagcactgcaca
gccctgctcctgggagggccatctcggaaaaaattgaagacagagcatcctggtgaaact
gctgtaatctgtgaggataagtga
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