Corvus brachyrhynchos (American crow): 103611879
Help
Entry
103611879 CDS
T08418
Symbol
SHMT2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc00260
Glycine, serine and threonine metabolism
cbrc00630
Glyoxylate and dicarboxylate metabolism
cbrc00670
One carbon pool by folate
cbrc01100
Metabolic pathways
cbrc01200
Carbon metabolism
cbrc01230
Biosynthesis of amino acids
cbrc01240
Biosynthesis of cofactors
cbrc04981
Folate transport and metabolism
Module
cbrc_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
103611879 (SHMT2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
103611879 (SHMT2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
103611879 (SHMT2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
103611879 (SHMT2)
Enzymes [BR:
cbrc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
103611879 (SHMT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHMT
TAZ1_RBM
Motif
Other DBs
NCBI-GeneID:
103611879
NCBI-ProteinID:
XP_017584186
LinkDB
All DBs
Position
Unknown
AA seq
337 aa
AA seq
DB search
MGLDLPDGGHLTHGYMTDVKRISATSIFFESMPYKLDPATGLIDYAQLEVTARLFRPRLI
IAGTSAYARLIDYARIKRGHXXXXXXXXRGLVAAKAIPSPFEHADVVTSTTHKTLRGARS
GLIFYRKGVRSVDKKTGKETLYDLEDRINFSVFPSLQGGPHNHAIAAVAVALKQASSPAF
QEYCQQVLRNAKAMAQALLQRGYTLVSGGTDNHLVLVDLRPKGIDGARAERVLELVSIPA
NKNTCPGDKSALTPGGLRLGAPALPSRQFREEDFQKVVEFIDEGITLALDVKSKTSKLQD
FKTFLLQDSETQQRLSNLRQRVETFARAFPMPGFSDH
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggggctggacctgcccgacgggggccacctcacgcacgggtacatgaccgacgtcaag
aggatctcggccacctccatcttcttcgagtcgatgccctacaagcttgatccggccacg
gggctgatcgattacgcccagctggaggtgacggcgcggctcttccgtccccggctcatc
atcgcgggcaccagtgcctacgcccggctcatcgactacgcccgcatcaagaggggacat
nnnnnnnnnnnnnnnnnnnnnnnncgcgggctggtggcggccaaggccatcccgtcgccc
ttcgagcacgcggacgtggtcaccagcaccacgcacaagaccctgcgcggcgccaggtcg
gggttgatcttctaccgcaagggcgtgcgctccgtggataagaagacagggaaggagacc
ctctacgacctcgaggacaggatcaacttctccgtgttcccttccctgcaagggggaccc
cacaaccacgccattgctgccgtggctgtggccctcaaacaggccagctccccggccttc
caggagtactgccagcaggtgctgaggaacgccaaggccatggcacaggcgctgctgcag
cgcgggtacaccctggtgtcaggtggcaccgacaaccacctggtgctggtggacctgcgg
cccaagggcatcgatggggcgcgggcggagcgggtgctggagctcgtctccatccccgcc
aacaagaacacgtgcccgggggacaagagcgcgctgacgccgggggggctgcgcctcggt
gcccccgcgctgccctcccgccaattccgtgaggaggatttccagaaggtcgtggagttc
atcgatgagggcatcacgctggccctggatgtcaagagcaaaaccagtaagctccaggac
ttcaagactttcctgctgcaggactcggagacgcagcagcgcctgagcaaccttcgccag
cgcgtcgagaccttcgctcgtgccttccccatgcccggcttcagcgaccactga
DBGET
integrated database retrieval system
