KEGG   Corvus brachyrhynchos (American crow): 103611963
Entry
103611963         CDS       T08418                                 
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
  KO
K15542  polyadenylation factor subunit 2
Organism
cbrc  Corvus brachyrhynchos (American crow)
Pathway
cbrc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cbrc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    103611963 (WDR33)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbrc03019]
    103611963 (WDR33)
Messenger RNA biogenesis [BR:cbrc03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     103611963 (WDR33)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 EIF3I Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_IFT122_1st Collagen eIF2A WD40_RFWD3 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_WDR11_2nd Beta-prop_WDR41 Ge1_WD40 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 103611963
NCBI-ProteinID: XP_008627757
LinkDB
Position
Unknown
AA seq 1322 aa
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRVWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYAPGDDLEPNSLAVIPGMGIPEQLKIAMEQEQMGKDESNDIEMTIPGLDWG
MEEVMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPLPPPPEPLNDRKEDIKLEEKKKS
QAEIEQEMAALQYTNPQLLEQLKIERLAQKQAEQVQPPPPGGSLHGPQPFPGQGPMSQMP
QGFQQPLPPQQMPMNMPQMGPPGPQGQFRPPGPQGQIGPQGPLHQGAGGPQGFMGPQGPP
GPQGPPQGMPRPQDLHGHQGMQRHPGPHGPMGPPGPQGNAGPQGHLGPQGLPGSQTHLGP
QGPPGPQGHLGPQGPPGGQGMQGPPGPRGMQGPLPHGMQGAPGSQGMQGPISQGPLMGLN
PRGMQGPPGPRDNQGPNPQGMMMGHPQEMRGPHMQSGLLGHGPQEMRGLQGPPPQGTMLG
PPQEMRGPPGPQGQQGPPQGSLVGPQGNMQGPQGQPNPSRGPHPSQGPLPFQQQKTPLLG
DGPRPPFNQDGQNPGPPPLIPGLGQQGGQGRLGPHNQGPGLNKGDARGPPNHHLGPLSDR
RHEQNSGGPEHGPERGLFRGGQDWSDGRDSRGMPDRRGPHPDFHDDFDRPDDFRDDFHPD
KRFGHRLREFEGRGGPPLQDEKWRRGGPGPPFPPDHREFEGGGSNRGPPGAWEGRRPSDD
RYPRDPEDARFRGRRDESFRRGGPSRHEGRGPRGRDGFPGPEDFGPDDAFDSPDENSRGR
DHGARGRGRGALRGARKGLLPTPDEFPRFEGGRKPESWDGNREPGPRPDHPPHDGHSPAN
RERSSSLQGMDMASLPPRKRPWHDGPGTSDHRDMDAPGGPPEERGKGRGNSGPSQRAPKS
GRSSSLDGDHHDGFHRDEAFGGGPGGVNNPSRGGRSGSNWGRGNNMNSGQSRRGGSRGGR
GR
NT seq 3969 nt   +upstreamnt  +downstreamnt
atggccacagaaatcggctccccgccccggtttttccacatgccgaggttccagcaccag
gcgcctcggcagctgttctacaaaaggcctgacttcgcgcagcagcaggcaatgcagcag
ctcaccttcgatgggaagcgcatgagaaaagctgtcaacagaaagaccatcgactacaat
ccctctgtaattaaatatttggagaatagagtatggcagagagaccaacgagatatgcga
gcgatccagcccgatgcaggatattataatgatttggtccctcctataggaatgctgaac
aaccctatgaatgctgtgacaacaaaatttgttcggacatctactaataaagtaaaatgc
ccagtgtttgttgtcaggtggactcctgaggggagacgcttggtcactggtgcatctagt
ggggagttcactttatggaatggactgactttcaattttgaaacaatattgcaggctcac
gacagccctgtaagggctatgacttggtcacacaatgatatgtggatgctgacagcagac
cacgggggatatgtgaaatactggcagtccaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgacgacggcactgttagaatctgggactttctacgttgccatgaggagagaattctt
cgaggacatggagcagatgtgaaatgtgttgactggcatccaacaaagggattagttgtt
tcaggaagtaaagatagccaacagcccatcaagttctgggatccaaagactggccagagc
cttgccacactacatgctcataaaaacacagtgatggaggtgaaactgaatctcaatggt
aactggctgctgacagcttctcgtgaccatctctgtaagctctttgacatccgtaacctg
aaagaagaacttcaggtcttcaggggccataagaaagaggccacagctgtggcctggcat
cctgttcacgaagggctgtttgccagtggaggatctgatgggtccttgttgttctggcat
gttggggttgagaaggaggttggtggaatggaaatggcccacgaaggaatgatctggagt
ctggcatggcatcccctcggacacattctctgttcaggctcaaatgatcacaccagcaag
ttttggactagaaatcggcctggagataaaatgcgagatcgttacaacttgaacctgctg
cctgggatgtcagaggatggtgtggaatatgctccaggagatgatctggagcccaacagc
ctggcagttattcctgggatgggaatacctgaacaattgaaaatagccatggagcaggag
cagatggggaaagatgagtccaatgacattgaaatgacaatcccaggactggattgggga
atggaggaagtaatgcaaaaggaccaaaagaaagtgccacagaaaaaagttccctatgca
aaaccaataccagcacagtttcagcaggcatggatgcaaaataaagttcctttgcctccc
ccacctgagccattgaatgatagaaaggaggatattaagctggaggagaaaaagaaatca
caggcagagattgagcaggaaatggcagcacttcagtacacaaacccacaactcttggag
caattgaagattgagagacttgcacaaaagcaagctgagcaagtgcagccaccaccccca
ggaggatctctccatggacctcagcctttcccagggcaaggcccaatgtcacagatgcct
caagggtttcagcagccccttccacctcagcagatgccaatgaatatgcctcagatggga
cctcctggtccacaaggacagttcagacctccaggaccccaaggacaaataggacctcaa
ggtccattacaccaaggagctggaggtccacaagggttcatgggaccacaaggacctcca
ggcccccaagggcccccacaaggaatgccacggcctcaggatttacacggacatcaagga
atgcagagacatccgggccctcatgggccaatggggcccccaggtccacagggtaatgct
ggcccacagggacacttgggaccgcagggcctgcctgggtctcagactcatttaggacca
cagggcccacctggcccacaaggtcacttgggtcctcagggtccccctggaggtcaagga
atgcaggggccacctggtccacgaggaatgcaaggacctcttcctcacggcatgcaagga
gctccgggatctcaagggatgcagggccctatatctcaagggcctttgatgggacttaat
ccaagagggatgcagggtccaccaggacccagagataaccagggacctaatccacaaggg
atgatgatgggtcatccacaagaaatgagaggtcctcatatgcaaagtggtttactagga
catggcccccaggagatgcggggccttcagggacccccgcctcaaggtacaatgctggga
ccgccacaagaaatgcgtgggccacctggtccacagggccagcaaggacctccacaaggc
tctttggtggggcctcaaggaaacatgcaaggacctcagggacagccgaacccttcgagg
gggccacacccttcccagggccctctgcccttccagcagcagaaaacacctctgttgggt
gacgggcctcgtcccccattcaatcaggatggacagaacccaggtcctcctccactgata
ccaggcctggggcagcaaggaggacaaggtcgtctgggccctcacaaccaaggacctggt
cttaataaaggtgatgcccgtggtccaccaaaccatcacctgggcccgctgtcggacaga
cggcacgagcagaacagtggtggccccgagcatgggccagagaggggcctgttccgaggg
ggccaggactggagtgatggcagagacagcaggggcatgccagacagacggggacctcac
cccgatttccatgatgactttgatcgaccagacgacttccgtgatgacttccatcccgat
aagagatttggccatcggttacgagaattcgaggggagaggaggcccaccattgcaagat
gagaaatggagacggggtggacctgggcctccctttcctcctgatcacagggaatttgaa
ggaggtggttcaaaccgtgggcctcctggtgcttgggaaggacggagaccttcagatgac
agatatccacgggatcctgaggatgcacgcttccgaggaaggcgggatgagagcttccga
agaggaggaccctcgagacacgagggccggggacccaggggcagagatggctttcctggc
cctgaagattttgggccagatgatgcttttgactctccagatgaaaactccagaggaagg
gaccatggtgctcgggggcgaggtcgaggtgctctaagaggagctcggaagggtttgctt
cctactccagatgaatttccacgctttgaaggagggcggaagccagaatcctgggatgga
aacagagaaccaggtcctcgtccagatcaccctcctcatgatgggcactctccagccaac
agagaacgttcttcttcactccagggcatggacatggcctcactgccaccacggaaacgt
ccctggcacgatggaccgggaacctctgaccacagagacatggatgctccaggtggacct
ccagaggagaggggcaaaggacgaggaaattcaggaccttcacagagagcgccaaaatct
gggaggtccagttctctggatggagaccaccacgatggattccacagggatgaagccttt
ggcggaggccccgggggagtcaataacccctctcgaggaggaaggagcggcagtaattgg
ggaagaggaaataacatgaactctggccagtcacggagaggaggatctcggggtggaaga
ggccgatag

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