Corvus brachyrhynchos (American crow): 103612005
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Entry
103612005 CDS
T08418
Symbol
ATG4B
Name
(RefSeq) cysteine protease ATG4B isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc04136
Autophagy - other
cbrc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103612005 (ATG4B)
04136 Autophagy - other
103612005 (ATG4B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cbrc01002
]
103612005 (ATG4B)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbrc04131
]
103612005 (ATG4B)
03029 Mitochondrial biogenesis [BR:
cbrc03029
]
103612005 (ATG4B)
Peptidases and inhibitors [BR:
cbrc01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
103612005 (ATG4B)
Membrane trafficking [BR:
cbrc04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
103612005 (ATG4B)
Mitochondrial biogenesis [BR:
cbrc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
103612005 (ATG4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
103612005
NCBI-ProteinID:
XP_017584233
LinkDB
All DBs
Position
Unknown
AA seq
320 aa
AA seq
DB search
MLRCGQMIFAQALVCRHLGRDWRWIKGKRQMDNYFNVLNAFIDKKDSYYSIHQIAQMGVG
EGKSIGQWYGPNTVAQVLRKLATFDTWSSLAVHIAMDNTVVMEEIRRLCQSNVPCAGAAA
CPALESDVLYNGCPEDVGLRERLTPWKPLVLLIPLRLGLTEINEAYIETLKHCFMMPQSL
GVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPSDSGCLPDESFHCQHPPCRMNIAEL
DPSIAVGFFCNTEADFNDWCQQIKKLSLVRGALPMFELVERQPSHFSNPDVLNLTPDSSD
ADRLERFFDSEDEDFEILSL
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctgtggccagatgatctttgctcaggccttggtctgcaggcatttgggaaga
gactggaggtggataaaagggaagaggcagatggataattacttcaacgttcttaatgcc
ttcattgacaaaaaagacagttactactccattcaccagatagcccagatgggagtcggg
gagggaaaatccataggccagtggtacggaccaaacacggtcgcgcaggtgctcagaaaa
cttgcaacttttgacacgtggagttccctggcagtacacatagccatggacaacacagtg
gtgatggaagaaatcaggcggttgtgccagtccaacgtgccctgtgctggagctgcagcg
tgccctgccctggagtcagacgtgctctataacgggtgcccagaggacgtggggctcaga
gagaggctcaccccgtggaaaccactggtgctgctgatacctctgcgcctcgggctcaca
gagatcaatgaagcctatattgaaacactaaagcactgcttcatgatgccccagtccctg
ggagtgatcggagggaagccaaacagtgctcactacttcattggctatgtaggtgaggag
ctcatttacctggatccccacaccacgcagccggcggtggagcccagtgacagcggctgc
ctccccgacgagagcttccactgccagcaccctccgtgcaggatgaacatcgccgagctc
gacccctccattgctgtgggctttttctgcaacacagaggcagactttaatgactggtgc
cagcaaatcaaaaagctgtccctggtcagaggagcgctgcccatgtttgagctggtggaa
cgccagccctcgcacttctccaaccctgatgtcctgaatctcacaccagactcctctgat
gccgacagattggaaaggttctttgactcggaagatgaagactttgaaatcctgtccctt
tga
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