KEGG   Corvus brachyrhynchos (American crow): 103612267
Entry
103612267         CDS       T08418                                 
Symbol
VIM
Name
(RefSeq) vimentin
  KO
K07606  vimentin
Organism
cbrc  Corvus brachyrhynchos (American crow)
Pathway
cbrc04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cbrc00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103612267 (VIM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbrc03019]
    103612267 (VIM)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cbrc04812]
    103612267 (VIM)
   04147 Exosome [BR:cbrc04147]
    103612267 (VIM)
Messenger RNA biogenesis [BR:cbrc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     103612267 (VIM)
Cytoskeleton proteins [BR:cbrc04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     103612267 (VIM)
Exosome [BR:cbrc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103612267 (VIM)
  Exosomal proteins of other cancer cells
   103612267 (VIM)
SSDB
Motif
Pfam: Filament Filament_head DUF1664 TolA_bind_tri TPR_MLP1_2 DUF7491 RBD-FIP DUF4515 Sec10_N YwqH-like LAMB4 CENP-F_leu_zip
Other DBs
NCBI-GeneID: 103612267
NCBI-ProteinID: XP_017584704
LinkDB
Position
Unknown
AA seq 406 aa
MYASKTTSVRLRSSMPPMRLHDSVDFSLADAINTEFKANRTNEKVELQELNDRFANYIDK
VRFLEQQNKILLAELEQLKGKGTSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAD
DIMRLREKLQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEIVFLKKLHDE
EIRELQAQLQEQHIQIDMDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSE
AANRNNDALRQAKQEANEYRRQIQSLTCEVDALKGSNESLERQMREMEENFAVEAANYQD
TIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRINMPIPTFAA
LNLRETNIESQPMVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq 1221 nt   +upstreamnt  +downstreamnt
atgtacgccagcaagacgacgtcggtgcggctgcggagcagcatgccgcccatgcggctc
cacgactccgtagacttctccctggccgacgctatcaacacggagtttaaggcgaaccgc
actaatgagaaggttgagctgcaggagcttaatgaccgcttcgccaactacatcgacaag
gtgcgcttcctggagcagcaaaacaagatcctgctggccgagctggagcagctcaagggc
aagggcacgtcccgcctgggtgacctctacgaggaggagatgcgggagctgcggcgacag
gtggaccagctcaccaacgacaaggcacgcgtggaagtggagcgggacaacctcgccgac
gacatcatgcggctgcgggagaagttgcaagaggagatgcttcagagggaggaggccgag
aacaccctgcagtctttcagacaggatgttgacaatgcctctctggcacgtcttgatctt
gagcgcaaagttgagtccctgcaagaggagattgtcttcttgaagaagcttcatgatgag
gaaatccgagaattgcaggcccaactccaggaacagcacatccagattgatatggatgtt
tctaagcctgatcttactgctgccctgcgtgatgttcgccaacagtatgagagtgttgct
gctaagaatcttcaggaagctgaagaatggtacaagtccaaatttgcagatctctctgaa
gctgctaacaggaacaacgatgccctgcgccaggccaagcaggaagccaatgagtaccgc
agacagatccagtctctcacctgcgaagtcgatgctcttaagggaagcaatgagtccctg
gagcgccaaatgcgtgaaatggaggagaattttgctgttgaagctgctaactaccaagac
actattggccgtctgcaggatgagatccagaacatgaaggaagagatggctcgccatctc
cgtgagtaccaggacctgctgaatgtaaagatggcccttgatattgagattgccacctac
agaaaactgctggagggtgaagagagcaggattaacatgcctattccaacctttgctgct
ttgaacctgagagaaaccaacattgagtctcagccaatggttgacactcactcaaagaga
acacttctaattaagaccgtcgaaactagagatggacaggttattaatgaaacttcccag
catcatgatgacttggagtaa

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