Corvus brachyrhynchos (American crow): 103612325
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Entry
103612325 CDS
T08418
Symbol
HSPD1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103612325 (HSPD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbrc03019
]
103612325 (HSPD1)
03110 Chaperones and folding catalysts [BR:
cbrc03110
]
103612325 (HSPD1)
03029 Mitochondrial biogenesis [BR:
cbrc03029
]
103612325 (HSPD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cbrc04147
]
103612325 (HSPD1)
Enzymes [BR:
cbrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
103612325 (HSPD1)
Messenger RNA biogenesis [BR:
cbrc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
103612325 (HSPD1)
Chaperones and folding catalysts [BR:
cbrc03110
]
Heat shock proteins
HSP60 / Chaperonin
103612325 (HSPD1)
Mitochondrial biogenesis [BR:
cbrc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
103612325 (HSPD1)
Exosome [BR:
cbrc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103612325 (HSPD1)
Exosomal proteins of other body fluids (saliva and urine)
103612325 (HSPD1)
Exosomal proteins of breast cancer cells
103612325 (HSPD1)
Exosomal proteins of colorectal cancer cells
103612325 (HSPD1)
Exosomal proteins of bladder cancer cells
103612325 (HSPD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
103612325
NCBI-ProteinID:
XP_008628183
UniProt:
A0A091ET45
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MLRLPTVLRQIRPVSRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKAIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFEKISKGANPVEIRRGVMLAVDAIIAELKKLSKPVTTPEEIAQVATISANGDQ
EIGNIISDAMKKVGRKGVITVKDGKTLNDELEIIEGMKFDRGYISPYFINTTKGQKCEFQ
DAYVLISEKKISSVQSIVPALEIANANRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGAVFGEEGLNLNVEDIQPHDFGKVGEVIVTKDDTMLLKG
KGEKAQIEKRIQEIIEQLEVTTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRCIPALDALTPANEDQKIGIEIIKRTLRIPAMTIA
KNAGVEGSLIVEKILQSPSEVGYDAMLGDFVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAEAVVTEVPKEEKEPAMGGMGGMGGGMGGGMF
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgctccgtttacctacagtactccgtcagataagaccagtgtccagagcactcgccccc
catctaacacgagcctatgcaaaagatgtgaagttcggagcagacgcgagagctctgatg
ctgcaaggagtagatcttttagcagatgctgtagctgtcaccatggggccaaagggaaga
acagttattattgaacaaagctggggaagtcccaaagtgacaaaagatggtgtgacagta
gcaaaggcaattgacttgaaagacaaatacaaaaacattggagccaagttagttcaagat
gttgccaataatacgaacgaagaagcaggagatggtaccaccactgcaacagtccttgca
cgagctattgccaaggaaggctttgagaagatcagcaaaggagctaatccagtagaaatc
aggaggggggtgatgctggcagtggatgccatcatagctgaactgaagaagctgtcaaaa
cctgttacaactccagaagaaattgcacaggttgccacaatatcagcaaatggagatcag
gaaattggcaatataatctctgatgcaatgaagaaagttggacgaaaaggcgtgatcact
gtcaaggatggaaaaactctaaacgatgaattggaaatcattgagggtatgaaattcgac
agaggctacatctctccgtattttattaatacaactaaagggcagaaatgtgaattccag
gacgcttatgttttaatcagtgaaaagaaaatttctagtgtacagtccatagttccagct
cttgaaattgccaatgccaaccgcaaacctttggtcatcattgctgaagatgttgatgga
gaagccctcagcactctagtcttgaacagactaaaggttggccttcaggttgttgctgta
aaagccccaggttttggtgacaacaggaaaaaccaacttaaggacatggcaattgctact
ggtggtgctgtgtttggagaagagggtttgaacctaaatgtggaagatattcagcctcat
gactttggtaaagttggagaggtcattgtgacaaaagatgacaccatgctccttaagggg
aagggtgaaaaggctcagattgaaaaacgcattcaagaaataatcgaacagctagaggtt
accaccagtgaatatgaaaaagagaaactgaatgagcggttggccaaactctctgatgga
gtagcagtattgaaggtgggtggcacgagcgacgttgaagtgaacgagaagaaggaccgg
gtcaccgacgccctgaacgccacccgtgcggccgtggaggaaggcatcgtcccaggtggt
ggctgtgcactgctgcgctgcatcccggccttggatgccttaactccagccaacgaggat
cagaaaattggcattgaaataatcaagagaacactgagaatcccagcaatgactattgca
aagaatgccggtgtcgaaggatcattgatagttgaaaaaatcctgcagagcccatcagaa
gttggctacgatgcaatgcttggggactttgtaaatatggtagaaaaaggaatcatagac
ccaacgaaggttgtgagaactgctctgatggacgccgcaggtgttgcgtctctcctgtca
acagcagaagcagtggtgactgaagttcctaaagaagaaaaggagccggcaatgggagga
atgggtgggatgggcggaggaatgggaggtggcatgttctaa
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