KEGG   Corvus brachyrhynchos (American crow): 103612456
Entry
103612456         CDS       T08418                                 
Symbol
SEH1L
Name
(RefSeq) nucleoporin SEH1 isoform X1
  KO
K14299  nucleoporin SEH1
Organism
cbrc  Corvus brachyrhynchos (American crow)
Pathway
cbrc03013  Nucleocytoplasmic transport
cbrc04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:cbrc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103612456 (SEH1L)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    103612456 (SEH1L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbrc03019]
    103612456 (SEH1L)
   04131 Membrane trafficking [BR:cbrc04131]
    103612456 (SEH1L)
Messenger RNA biogenesis [BR:cbrc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     103612456 (SEH1L)
Membrane trafficking [BR:cbrc04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    103612456 (SEH1L)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd Beta-prop_WDR3_2nd ANAPC4_WD40 Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_IFT140_1st EIF3I
Other DBs
NCBI-GeneID: 103612456
NCBI-ProteinID: XP_017584965
LinkDB
Position
Unknown
AA seq 407 aa
MAASLMYYSVSFIYKLCDCILISQQVWDKSENGDWHCTASWKTHSGSVWRVTWAHPEFGQ
VLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLAT
CSADGVVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHSPMIAVGSDDNSPN
ILAKVQIYEYNENTRKYAKAEALMTVTDPVHDIAFAPNLGRSFHILAVATKDVRIFTLKP
LRKELTSSGGLTKFEIHIVAQFDNHNSQVWRVSWNITGTVLASSGDDGCVRLWKANYMDS
WKCTGILKGNGSPVNGSSQQGIFNASLGSANTSLQNSLNGSSASRYFFPPLDSPRAGSRW
SSHAQLLPPPPLIEQSCDADTANLQYPHPRRRCVSRPLNLLPENEGV
NT seq 1224 nt   +upstreamnt  +downstreamnt
atggctgcgtctttaatgtactactcagtaagctttatttacaaattgtgtgattgtatt
ttgatttctcaacaggtctgggacaaaagtgaaaatggagattggcattgcaccgccagc
tggaagacacatagtggatccgtgtggcgtgtgacatgggcccatcctgaatttgggcag
gtcctggcttcctgctcgtttgatagaacagcagctgtatgggaagaaatagtgggagag
tcaaatgataaactccgagggcagagtcactgggtcaagaggaccactctagtagacagc
aggacatcagttacagatgtgaagtttgctcccaagcacatgggtcttatgttagcaacc
tgttcagcagatggagttgtaaggatctatgaagctccagatgtgatgaatctcagccag
tggtcactacagcatgaaatctcatgtaagctaagctgcagttgtatttcttggaatcct
tcaagctctcgagcacattctccaatgatagctgtaggaagtgatgacaacagtccaaat
atactggctaaggttcaaatttatgaatataatgaaaataccaggaaatatgcaaaagca
gaagctctgatgacagtcacagatcctgtacatgatattgcatttgctccaaatctggga
agatccttccacatcttggctgtagcaaccaaagacgtacgaattttcacactaaaacct
ctaaggaaagaattgacttcatcaggaggattaacaaaatttgaaatccatattgtggca
cagttcgataatcacaactcccaggtgtggcgagtgagctggaatattacagggacagtg
cttgcctcctctggtgatgatggctgtgttaggctctggaaggctaattacatggacagc
tggaagtgtactggtatactgaaaggtaacgggagtccggtgaatggtagttctcagcag
ggaatttttaatgcctctctaggttcagccaatacaagtctacagaattcactaaatgga
tcatctgccagcaggtatttctttccccctctggattccccacgggctggatcgagatgg
tccagtcatgcccagctccttcctcctcctcctctgatagagcagtcttgtgatgctgac
actgccaacctccagtatcctcaccctcgcagacgatgtgtatctcggcctcttaatctt
ttacctgagaatgaaggggtttaa

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