Corvus brachyrhynchos (American crow): 103612671 Help Entry 103612671         CDS       T08418                                  Symbol MSH6 Name (RefSeq) DNA mismatch repair protein Msh6   KO K08737   DNA mismatch repair protein MSH6 Organism cbrc  Corvus brachyrhynchos (American crow) Pathway cbrc03430   Mismatch repair Brite KEGG Orthology (KO) [BR:cbrc00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     103612671 (MSH6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:cbrc03400]     103612671 (MSH6) DNA repair and recombination proteins [BR:cbrc03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      103612671 (MSH6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  MutS_V MutS_III MutS_I MutS_IV PWWP MutS_II nSTAND_NTPase5 Motif Other DBs NCBI-GeneID:  103612671 NCBI-ProteinID:  XP_017585604 LinkDB All DBs Position Unknown AA seq 1261 aa AA seqDB search MEGYPWWPCLIYNHPIERTIVRGKGKSTRIHVQFFDDSPTRGWISIKYLKPYKGSSDGET MKGGMFYSTKPEIKRAMVLADDAMNKDKTKRLELAICNEPSDTEEEEEEEMEEMSENASG NSEDCNSEEDAKSNKRGMSRXXXXXXXXRRVLDSDSDHDGSDVEFKPDGKEAASSEEGSS GVDENESSDTEAESVAESPIKVPSKRKRGEVKKPAKRSSLGNECSETPKRAPTVSSEAKS KLTSFAAPESFESQANASSGGTGGFSVWEHEKLDWLQEGKRKDAHRRRQGDPDYDPCTLY VPEDYLNKCTPGVRRWWQLKSQNFDAVICYKVGKFYELYHMDAVTGVNELGLIFMKGTWA HSGFPETAFGRFSDVLVQKGYKVARVEQTETPEMMEARCKSTGHSTRFDKVVRREICRII TKGTQTYSVMDCDPSENHSKFLLCMKEKDDSAGTRVYGVCFVDTSVGKFHVGQFPDDRHC SRFRTLVAHYTPVQVLFEKGNLSVDTQKILKGSLVSCIQEGLTSGSQFWNASKTLKVLLE EGYFKEKQNSENGCSLPSVIKSLTSESDSLGLTPGENSELALSALGGCVFYLKKCLIDQE LLSQANFEEYVPVDITTAKTVSSSSLFARTSQRMVLDGVTLMNLEVLQNGTNGSTEGTLL ERIDSCCTPFGKRLLKQWLCAPLCNPKSINDRLDAVEDLLAVPDKMSEVSEHLKKLPDLE RLLSKIHSIGSPLKSQNHPDSRAIFYEELKYSKKKIADFLSALEGFKVMNEIVDVMEEVA SDFKSKVLKQLVTRKAKNPDGRFPDLSAELTRWDTAFDHNQARKTGVITPKAGFDPDYDG ALQDIKAVEEDLQKYLDKQRKLLGFKSVQYWGTGKNRYQMEIPESAVSRNLPEEYELRSS RKGYKRYWTKEIEKMLAAMVNAEERRDAALKDCMRRLFYNFDKNSKDWQTAVECIAVLDV LMSLAHYSQGGDGPLCRPVILLPVENAPPFLELRNSRHPCITKTFFGDDFIPNDIVIGIK DEGSSSEASCVLVTGPNMGGKSTLMRQAGLLVVMAQLGCYVPAEACRLTPIDRVFTRLGA SDRIMAGESTFFVELSETSSILQHATEHSLVLVDELGRGTATFDGTAIASAVVKELAESI RCRTLFSTHYHSLVEDYSHSGAVRLGHMACMVENESEDPSQETITFLYKFIEGACPKSYG FNAARLADIPEDVIQKGHRKAKEFEKTTLSLRVFRYLCQVVDGATSDANAVRKLTAMINR L NT seq 3786 nt NT seq  +upstreamnt  +downstreamnt atggaaggttatccctggtggccatgtctcatttacaaccaccccattgaaagaacaata gtcagaggaaaaggaaaatccactcgtatccatgtgcagttctttgatgacagccctaca aggggttggatcagtattaaatacctgaagccatataaaggttcatcagatggggagaca atgaagggaggtatgttttacagcacaaagcctgaaattaaaagagccatggtgttggca gacgatgccatgaacaaagataaaaccaagaggcttgaactggcaatatgcaatgaacct tcagacacagaggaggaggaagaggaagaaatggaggagatgagtgaaaatgcatcgggc aacagtgaagactgcaatagtgaggaggatgcgaaaagcaataagcgagggatgagcagg nnnnnnnnnnnnnnnnnnnnnnnaaggagagtgctggattctgacagtgaccacgatggc tctgatgtggagttcaagcctgatgggaaagaagcagcaagcagtgaggaaggcagcagt ggggtggatgaaaatgagtcttctgacacagaggcagagagtgttgcagagagccccata aaagtcccttctaaacgaaagagaggagaggtgaaaaagcctgctaaaaggagtagcttg ggaaatgaatgttctgaaacacccaaaagagccccaacagtctcctcagaagccaagtct aagctgacatcgtttgcagcacctgaaagttttgagtctcaagcaaatgctagcagtgga ggcactggtggcttctcagtgtgggagcacgaaaagcttgactggctgcaggaagggaag aggaaggatgcgcacaggaggcgccagggtgaccctgattacgacccctgtactctgtat gtgcctgaggattatctcaacaagtgcacgccgggggtgcggaggtggtggcagctcaaa agccaaaactttgatgctgtgatttgctacaaggttggaaagttctatgagttgtatcac atggatgcagtcactggcgtgaatgagctgggcctgatctttatgaagggcacttgggcc cactcaggtttcccagaaactgcatttggccggttctctgatgtgctggtgcagaagggc tacaaggtggcgcgcgtggagcagacggaaacgcccgaaatgatggaagcacgctgcaag tcaacgggccactccaccaggtttgacaaggtggtgcgccgggaaatctgcaggatcatc accaagggaacccagacctacagcgtcatggactgcgacccctccgagaaccacagcaag ttcctgctgtgcatgaaggagaaggatgactcggccgggacgcgcgtgtacggggtctgc tttgtcgacacctccgtgggcaagttccacgttggccagttcccagacgaccgtcactgc tccagatttaggactttggtagctcattacactcctgtgcaggtgctgtttgagaagggg aacctgtctgtggacacacagaagatactgaagggctcgcttgtttcttgcattcaggaa gggctgacctcgggttcccagttctggaatgcatctaaaacactaaaagtccttcttgag gaaggatatttcaaggagaagcagaattctgaaaatggatgttctctgccctctgtaatc aaatctctgacttcagaaagtgactccctgggattaactcctggtgaaaacagtgaatta gctttgtcagctcttgggggatgtgtcttctatctcaaaaaatgtctgattgatcaggag ctgttatcgcaggcgaacttcgaggaatatgtccctgtggatatcactactgcaaaaacc gtgagttcaagtagtttgtttgccagaaccagccagcggatggtgctggatggagtcacc ctgatgaacttggaagtcctgcagaacggaaccaatggaagcacagaaggtactttgttg gaaaggattgattcttgttgtacaccattcgggaagcgactcctgaagcagtggctctgc gctccgctttgtaatcctaaatccatcaacgatcgtttggatgctgttgaggacctcctg gcagtgccagataaaatgtctgaagtcagtgagcacctgaagaaactgcctgaccttgaa aggctgctcagcaaaattcacagcattgggtcaccactcaaaagtcagaaccatcctgac agcagggccatcttctatgaagaactcaaatacagcaaaaagaaaatcgctgacttcctg tctgccctggagggatttaaagtaatgaatgaaattgtcgatgtcatggaggaggttgcc agtgacttcaaatccaaagtcctgaagcagctggtcacccgcaaggccaaaaatcccgat ggccgcttccctgacctgagtgctgagctcacgaggtgggacactgcctttgatcacaac caggctcggaagacaggagtgattaccccaaaggcaggttttgaccccgattatgatgga gcactacaggatatcaaagctgtcgaggaagatcttcagaagtacctggataagcaacgc aagctgcttgggttcaaatctgtgcagtactgggggacaggcaagaaccggtaccagatg gaaatcccagaaagtgctgtatctcgtaatctgcccgaggaatacgagctgaggtcgagc aggaagggatacaagcgctactggaccaaggagattgagaagatgctggctgcgatggtg aacgccgaggagcgccgcgacgccgccctcaaggactgcatgaggcgcctcttctacaac ttcgacaagaacagcaaggactggcagacagctgtggagtgcattgctgtgctggatgtc ttgatgtcccttgctcactacagtcaaggtggtgatggacccctgtgccgacctgtaatt ctgctgcctgtggaaaatgctcctcccttcctggaacttagaaattcccgccatccgtgc atcacaaaaactttctttggggatgattttattcccaatgatatcgtaattggcatcaag gatgaaggcagcagcagtgaggcctcctgtgtgctggtaaccggcccaaatatgggtggc aaatctacgcttatgcgacaggctggtctcctggtggtcatggcccagctggggtgctac gtgcccgcggaagcctgcaggctcacgcccatcgaccgcgtgttcacgcggctcggcgcc tccgacaggatcatggccggtgaaagtaccttctttgttgaactgagtgagacttccagc attctccagcatgcaacagagcattcccttgttctcgtggatgaactgggcagaggcaca gccacgtttgacggaacagccatagcgagcgcggtggtgaaggagctggcggaaagcatc cggtgccggacgctgttctccactcactaccactccctggtggaggactattcccacagc ggggctgtacgcctgggccacatggcatgcatggttgaaaatgagagtgaagatccaagt caggaaacaattacgttcctgtacaagttcattgaaggagcctgcccaaagagctacggc ttcaatgcggcaagacttgcagatattccagaggatgtcattcagaaggggcacagaaaa gccaaagaatttgaaaaaacaaccctctcacttagagtatttaggtacctgtgccaggtg gtggatggagcaaccagtgatgcaaatgcggttcggaaactcacagcgatgatcaaccgg ctttag

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