Corvus brachyrhynchos (American crow): 103612766
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Entry
103612766 CDS
T08418
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbrc03016
]
103612766 (TRMT13)
Enzymes [BR:
cbrc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
103612766 (TRMT13)
Transfer RNA biogenesis [BR:
cbrc03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
103612766 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-U11-48K
Methyltransf_32
OrgC
DUF7077
Motif
Other DBs
NCBI-GeneID:
103612766
NCBI-ProteinID:
XP_008628699
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MSSFPRHHRRAHPRTGGSNPRVSGPQGAEEAAEQNDRKRIPCPLDPKHTVYEDQLQKHLK
KCNSREKPRPVYFVQDINAGLKDVAEIPEKQVPLSSLSIEELQNLIIKLKKASNGLELHL
KEQILSHQALQEALNDPKNGESAFKHLKQQASILGNMEKLHLLGPGRCFVEFGAGRGKLS
HWVDVALQNVESVQFLLVERATTRFKVDGKHKRRDSIFERLQVDIQHLCLNKVPILEKKK
LPVVGIGKHLCGAATDLALRCLVESYTTCCDGGDEEPAPKRSRAAQTEVAPQRSAGNEST
TEDHKPVAGIVIALCCHHKCDWTHYVGREFFKSVGLGPVEFHYFQRMSSWATCGMRETTS
KASTSEDSEDQTDDTEEHEQTLSRTESGSDTLQGILSAEERKEIGCLCKRLIDHGRIEYL
QQQGYKAALQYYTESAVSLENVLLTAVPSPSLIPEPTI
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcttccccagacaccaccgccgtgcgcaccctcgcacgggtggctcaaacccg
cgggtctctgggccgcagggcgctgaggaggccgcggaacaaaatgacagaaaaagaatt
ccgtgccctcttgatccaaaacacactgtatatgaagatcaactacaaaagcatttaaaa
aaatgtaactcaagagagaagccaaggcccgtctactttgttcaagatattaatgctggt
ttaaaagatgttgcagaaataccagaaaaacaagttcctctatcttctctctctatcgaa
gagctgcagaacttaattatcaagttgaaaaaagcaagtaatggcctggaacttcatctt
aaggaacaaatactgtcccaccaggctttacaagaagccttaaatgacccaaagaatggg
gaatctgctttcaaacacctgaaacaacaggcttctattttaggtaacatggaaaaattg
catttacttggtccaggaaggtgttttgttgagtttggagctgggcgaggaaagctgtct
cattgggttgatgttgccttacagaatgttgaaagtgttcagtttttgcttgtggaaagg
gcaaccacaagattcaaggtggatggaaaacataaaaggagagattctatatttgagaga
cttcaagtagacattcagcacttatgtttaaataaggtacctattttggagaagaaaaaa
ctaccagtggtaggaattgggaagcatttgtgtggtgctgcaacagatcttgctttgaga
tgcttggttgaaagttacaccacttgctgtgatgggggagatgaagagcctgcaccaaaa
cgctccagggctgctcagacagaggtggctcctcagagatctgctggtaatgaaagcacc
acagaggaccataaacctgtagctggaattgttattgctctgtgttgccatcacaagtgt
gactggacacattatgtaggcagagagttctttaaatcagtaggactgggaccagtggaa
tttcattattttcagagaatgagtagttgggccacttgtggcatgcgagaaaccacaagc
aaagcttctacaagtgaagacagtgaagatcaaactgatgacacagaagaacatgagcaa
acactcagcaggacagaaagtggttcagatactttacaagggatactgagtgctgaggaa
cgaaaggagatcggctgcctctgtaaacggctgattgatcatggccggattgagtattta
caacaacaaggatacaaggctgcactacagtattacacagagtctgctgtgtccttggag
aatgtgctgttgacagctgtcccaagtccttctttgataccagagccaactatatga
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