Corvus brachyrhynchos (American crow): 103612774
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Entry
103612774 CDS
T08418
Symbol
ABCA4
Name
(RefSeq) retinal-specific ATP-binding cassette transporter isoform X1
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103612774 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbrc02000
]
103612774 (ABCA4)
Transporters [BR:
cbrc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
103612774 (ABCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
Motif
Other DBs
NCBI-GeneID:
103612774
NCBI-ProteinID:
XP_017585363
LinkDB
All DBs
Position
Unknown
AA seq
2333 aa
AA seq
DB search
MSFFRQVRLLLWKNWILRKRQKLRFLVELVWPLSLFLALVWLRKANPLYRQHECHFPNKA
MPSAGPLPWLHGIFCNMNNPCFRSTTPGEGPGVVSNYKNSILARVYKDAQELLLEAPEIH
DLGRIWEELIIMTQFMETMRTNPERIAGRGIRILDILKDGETLTSFLLENVGLTDFVVYQ
LINAQVRPEQFAYGVPSLTLKDIACSEILLDRFIIFSSRRGLPSVHKAMCALSQDSLQRV
EDVLYANVDFFKLFRLLPTVLDRNSPGADLKAWGRVLSNVSQAVQKLARKPSVQDLLMVL
QPFVQDGRPESLSHLVSSLSDLFCGYPEGGGSRVFSFNWYEDNNYKAFLGIDSTRKKSGY
LYDNTTTPFCNALIQNLESNPLTKIAWSAVKPLLMGKILFAPDSPSVREIIKNANSTFEE
LERLRLLTKAWEEVGPQLWYFFQNSLQMNMIRDSLKHPTVRDFLNSQMGAEGFTVEHIIN
FLHNGSSRSREKGMVDFDWRNIFSAVDQVLRLLSQYLECLTLDKFEGYLNETQLTHQALY
LLEENKFWAAVVFPDLEPTTRNLPPHVTYKIRMDIDAVEKTNKIQDRYWDPGPRADPVDD
LRYIWGGFAYLQDMIERGIIKTQTSTEVPVGIYLQQMPYPCFVDDVFMITLNRAFPIFMV
LAWIYSVSMTVKSIVLEKEMRLKEAMKNRGITNGMIWCTWFLDSFFMMALSTFLLTALIM
RGQVLHYSNPFLFFLFLLTFTTATIMQCFLFSTFFSKANLAAACSGVIYFTLYLPHIVCF
AWQDRLTVNLKILASLLSQVAFGFGTEYLSRYEEQGLGLQWGNIRTSPLEGDEYSFLFSI
NMMLFDAFLYGILSWYLDNVFPGDYGLPQPWYFPVLESYWFGSRSPEAEKTATADEKSPE
SEGCVDQKTMEREKNESRPNKSEEPEKTEEKSDSQGKKDGKNKQCKHKREKESGEQGKPK
TDVQDKDEININTLFEPEPTGLVPGVCIQNLVKIFANRPKPAVDGMNLTFYEGQITAFLG
HNGAGKTTTMSILTGLFPPTSGTVLVGGLDIQTHMDSIRHRLGMCPQHNILFNHLTVAEH
ILFYSQLKGRSRDEAEQELETMLEDMGLTHKRNEEAQNLSGGMQRKLSVAIAFVGEAKVV
VLDEPTSGVDPYSRRSIWDLLLKYRPGRTIILSTHHMDEADILGDRVAIISQGKLFCSGS
PVFLKNSFGSGFYLTLVRKVRTTKMGRATSFCSCGSQCSCSCSSCVHRGEEGIPELELDG
DLNELAEVIHHHIPEAKLIESIGQELIYLLPNKNFKQRSYASLFRELEETLDDLGLSSFG
VSDTPLEEVFLKVTAEADPEMQKTGDTQENGSALGKTPTENKPAEQTTLKANDTSRMPVG
RTGDQNEGKGSRQYKGFQLVHQQIKALLIKRFHHASRSHKDFLAQVVLPASFVLLSLVLT
VIIPPFGEYPALTLHPWIYGQQFTFFSNERPGNEQMVSLTHAFLNKPGFGTRCMKNQPLL
NYPCNNTPTAWNTPAVHPNLSSLLLSQEWSPENPSPSCKCSTHKRLTMLPECPAGAGGLP
PPQRVQRSTEILQDLTHRNISDFLVKTYPTLIKGSLKSKYWVNEQRYGGISVGGRLPVLH
ISGDQIIDFLSDLGQMMNVTGGQTSLAAAKEIPNFLKYMETEDNIKVWFNNKGWHAMVSF
LNIANNAILRANLRTGQAPEEHGITAINHPLNLTKEQLSEVTVLTTSVDAVVAICVIFAM
SFIPASFVLYLIQERVTKAKHLQFVSGVSPVIYWVTNFMWDIVNYALSAGMVVAIFAGFN
KKAYASPTNLPVLVALLLLYGWAVIPMMYPASSFFSIPSTAYVALSCINLFVGINSSAIT
FILELFENNPSLLKFNKTLKNVLLILPHFCLGRGLIDLAMNQAVTEVYARFGEEHVSDPF
QWDFVGKNLVAMALQGVVFFILNLLMQHHLFSTRWFAETAMSPIINEDEDVAEERKRIMN
GGNTTDILKLQELTKIYAGQRKPAVDRLCVGIRPGECFGLLGVNGAGKTTTFKMLTGDTD
VTSGDAVVAGNSVLTHISKVHQNMGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIKRV
AEWGIQKLGLPMYADHLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQSRRLLW
DSIVGVLRDGRAVVLTSHSMEECEALCTRLAIMVQGTFKCLGTIQELKYKFGDGYIVTLK
IKSPKSGLPPDTTPAEQFIHINFPGSLQREKHYNMLQYQICSSSLAKIFRLIISNKENLH
IEEYSVSQTTLDQVFVNFAKQQMEDEEIPLHPRAAGASREAKVSPALHQQAVA
NT seq
7002 nt
NT seq
+upstream
nt +downstream
nt
atgagcttctttaggcaagtcagacttctgctttggaagaactggatccttcggaaaaga
caaaagcttcgttttctagtggagcttgtatggcctctgtcattgtttcttgcacttgtc
tggctgaggaaagctaatccactgtatcgtcaacatgaatgtcacttcccaaacaaggca
atgccatcagcaggaccactcccatggttacatggcatcttctgtaacatgaacaatccc
tgtttccgcagcacaacccccggagagggtccaggtgtagtgtccaactacaaaaattcc
atccttgcaagggtgtataaagatgctcaggagcttttactggaagcccctgaaatccat
gaccttggaagaatctgggaagaactgatcattatgactcagtttatggaaacaatgaga
actaatcctgaaagaattgcaggaagaggaatacgaattctagacattttgaaagatggg
gagaccctcacctccttcttactagaaaatgttggcctcacagattttgttgtttaccag
cttattaatgctcaagtgcgccctgaacagtttgcctatggtgtccctagcttgactctg
aaggacattgcttgcagtgagatactcctggaccgctttattatcttcagcagccgaaga
ggtctcccttctgtacacaaggccatgtgtgccctgtcccaggacagtctacaaagagta
gaagatgtcttgtatgcaaatgttgatttctttaagctatttcggctgcttcccactgtg
ttggacagaaactcaccaggtgctgacctgaaggcctgggggagggtgctgtctaatgtt
tcccaagcagtgcaaaagctagccaggaagccaagcgttcaggaccttttgatggttctg
caaccatttgtacaagacggaaggccagaatccttaagccacttggtgagttccctgtcg
gatcttttctgtggctacccagaaggaggtggatccagagtgttttccttcaactggtat
gaagataacaactacaaagctttcctggggattgactcaacaaggaagaaatctggttat
ctttatgataatacaaccacacccttttgtaatgcattgatccagaacttggaatcaaac
cctttaaccaaaatagcctggagtgctgtgaagcctctgctgatgggaaaaattctcttt
gctcctgattcaccttctgtacgggaaatcataaaaaatgcaaactccacttttgaggaa
ctagaacgcctccgactgttgaccaaagcttgggaggaagtaggacctcagctgtggtac
ttctttcaaaacagcctgcaaatgaatatgatccgtgactctctgaagcaccctacagtg
agggacttcctgaacagccagatgggtgctgaaggcttcactgtggaacacataatcaac
tttctccacaatggatcttcaaggagccgggagaagggaatggtggactttgactggcgg
aacattttcagtgctgtagaccaagttctgcgtttgctcagtcagtatttggagtgcttg
accttggataaatttgaaggttatcttaatgaaactcaactgactcatcaagccctttat
ctgctggaggaaaacaaattctgggctgctgtggtttttccagacctagaacctacaacc
agaaatctcccaccgcatgtgacatacaagatccgaatggacatagatgcagtggagaaa
acaaacaaaatccaagacaggtactgggatcctggtccaagagctgatcctgtggatgat
ttacgttatatctggggaggctttgcgtatctccaagacatgattgagcgtgggattata
aagacccagaccagcactgaagtgccagtgggaatttatctccagcaaatgccatatcca
tgttttgtggatgatgtcttcatgatcaccttaaaccgcgcctttcccatcttcatggtg
ctggcttggatatattcagtctccatgactgtgaagagtatagtgctagagaaggaaatg
cgtctgaaagaagctatgaagaacaggggtataaccaatggcatgatttggtgcacttgg
ttcctagacagctttttcatgatggctctgagcacattcctcctcacagctctgattatg
cgtggacaagtgctacattatagcaatccatttctcttctttctattcctactgacattc
accacagccaccataatgcagtgtttcttgttcagcaccttcttctccaaagcaaatctg
gcagctgcctgcagtggagtcatctacttcaccttgtacctgccccacatcgtctgcttt
gcttggcaggaccgtctgactgttaatctgaagatcctagcaagtttgctttctcaagta
gcttttgggttcggtacggaatacttgtcacgctatgaagaacaaggtcttggcctacag
tggggtaacatcagaaccagtcccttggaaggagacgaatatagttttctcttttccatt
aacatgatgctttttgatgcttttctctatggaatactgtcttggtatctcgataacgtt
tttccaggggactatgggttaccacagccttggtatttccctgtgctagaatcatattgg
tttggctctagaagcccagaagctgagaaaacagcaactgctgatgaaaaaagtccagag
tcagaaggctgtgtggatcagaagaccatggaaagggaaaaaaatgaaagcagaccaaat
aaatctgaagaacctgaaaaaacagaagaaaagagtgacagccaggggaagaaggatggt
aaaaacaaacaatgtaaacacaaacgagaaaaagaatccggcgagcaggggaagcctaag
acagatgtccaggacaaagatgaaattaatataaataccttatttgagcccgagccaaca
ggactggttccaggagtatgcattcagaacctggtgaagatttttgcaaacaggcccaaa
ccagcagtagacgggatgaatcttactttttatgagggtcagatcacagccttccttggt
cacaatggagcaggaaagacaaccaccatgtcaatactgacaggcctcttcccacccaca
tctggaactgtgctggttggcggcctggatatccagactcacatggactccattcggcac
agattagggatgtgccctcagcacaacatcttgttcaatcaccttactgtagcagagcac
atcttgttttattctcaactgaaaggaagatccagggatgaagctgagcaagagctggaa
acaatgctggaagacatgggcctcacccataaaaggaatgaagaagctcagaatttgtca
ggtggaatgcaaaggaaactgtctgttgccattgcttttgtgggtgaagcaaaagtggta
gtcctggatgagcccacttctggagttgatccatattccaggagatctatctgggatctt
ctgctgaaatatcgcccaggcagaacaattatcctatcaacccatcacatggatgaggca
gacatccttggagacagggtagccatcatatcccaagggaaactcttctgctcaggctct
cctgtattcctaaagaactctttcggctctggcttttatctcacccttgttcgcaaagtg
agaaccacaaaaatgggaagggctacttcattttgtagctgtggatctcagtgctcctgc
tcctgctccagctgtgtgcacaggggtgaagaaggcattccagagctggaactggatgga
gatctaaatgagctagccgaagtaatccaccatcatatcccagaagcaaaattaattgaa
agcattggtcaggaactcatttatcttttgcccaataaaaactttaaacaacgatcttat
gccagtctcttcagagaactggaggaaacattggatgacctgggactcagcagttttgga
gtttcagacacaccacttgaagaggttttcctaaaggtcacagcagaagctgaccctgaa
atgcaaaaaacaggagatactcaagaaaatggttctgctcttggcaaaactcctactgag
aacaaaccagctgaacaaaccacactgaaagctaatgacacttctcgaatgccagtaggc
agaacaggagatcaaaatgaaggcaaagggtcccgacagtataaaggctttcagcttgta
catcagcagatcaaagcactgctcatcaaacgcttccaccacgcctcccgcagccacaag
gacttcctagcacaggtcgttctccctgctagttttgtgttgctgtctctagtacttaca
gtcattattcctccatttggagaatatcccgccttaacattacacccttggatctatgga
caacagtttactttcttcagcaatgaacgtcctggcaatgagcagatggtctcccttact
catgctttcttgaataaaccaggatttggaactcgctgcatgaagaatcagcctcttttg
aactacccatgcaataatacgccaactgcctggaacacaccggctgttcatcctaaccta
agcagcctcctgctgagccaagagtggagccctgagaatccatcaccttcctgcaagtgc
agcactcacaagagactcactatgctgccagaatgccctgcaggtgcaggaggcctccca
ccaccacagagagtgcaacgcagcacagaaattcttcaagatctgacccacagaaatatt
tcagattttctggtgaaaacatatcccactttgataaaaggaagcttgaagagtaaatac
tgggtcaatgagcagagatatggaggaatttctgtaggaggaagacttccagtccttcac
atttctggagatcaaattattgattttttaagtgatcttggccaaatgatgaatgtgaca
ggaggacaaacttcactggctgctgctaaagaaatccctaatttccttaaatacatggaa
actgaagataatattaaggtgtggtttaacaataaaggatggcatgctatggttagtttc
ctcaatatagcaaataatgcaatcctcagagctaatctgaggactggccaagcccctgag
gaacatgggatcactgctataaaccatcctctgaacctcaccaaggagcaactctctgaa
gtcactgtactgacaacttcagtggatgctgttgttgccatctgtgtgatttttgccatg
tcctttataccagccagttttgttttatacctgatccaagaacgtgtaacaaaagccaag
cacctccagtttgtcagtggtgtgagccctgttatctattgggtaactaacttcatgtgg
gacatagtgaattatgcactgagtgctggaatggttgtggctatatttgctggattcaac
aagaaagcatacgcctctccgaccaatctccctgtgctcgttgccttgctgctcctgtat
ggatgggcagtaattcccatgatgtaccctgcttcttctttcttcagtatccccagcact
gcttacgttgcattgtcttgtattaatctctttgtgggaatcaacagcagtgccattacc
ttcatcctggaattatttgaaaataacccgtctttgctaaagtttaataaaacattgaaa
aatgtgctgcttatcctcccacatttttgcttgggccgtggactcattgacttggccatg
aaccaagctgtgactgaagtatatgcaaggtttggtgaggagcatgtttctgatcccttt
cagtgggactttgttggaaagaacctggttgccatggctcttcaaggagttgtgttcttc
attctgaatctccttatgcaacaccatttgttctccacaagatggtttgctgagactgcc
atgtcacctattattaatgaagacgaggatgttgcagaagaaagaaaaagaattatgaat
ggaggaaacacaactgatatcttaaaattacaagaactgaccaagatttatgcaggtcaa
cgcaagcctgcagtggacagactctgtgttggcatccgtcccggagagtgctttggcctt
ttgggagtgaatggcgctggcaaaacaacaacattcaaaatgctgactggagatactgat
gtgacatctggagatgctgtagtggctggcaatagtgtattgacccacatttctaaagtc
caccaaaacatggggtactgtcctcagtttgatgccattgatgacctgctcacaggacga
gaacacctctacctatatgcacgcttgcggggggttccagcagaagaaatcaagagggtt
gctgaatggggcatccagaagctgggacttcctatgtacgcagaccacctggcagggacc
tacagtggtggcaacaagcgcaagctctccactgccattgccctgataggctgcccacca
ctcgtcttgctagatgaaccaaccaccggaatggaccctcagtcccggcgcctcctgtgg
gactctattgttggtgtgctcagagatgggcgagcagtggttctaacctcacacagtatg
gaagaatgtgaagccctctgtactcgtttggccatcatggtacaaggtaccttcaaatgc
ctaggcacaattcaggagctaaaatacaagtttggagatggctacattgtcaccctgaaa
atcaaatctccaaagtctgggctgcctccagatactactcctgctgagcaattcatacac
atcaactttccagggagtttacagagagagaaacactacaacatgctgcagtatcagatt
tgctcttcctctctggctaagatttttcgattaataatctccaataaggaaaatttgcat
attgaagaatattctgtgtctcaaacaacattagatcaggtttttgtgaactttgctaaa
cagcagatggaggatgaggaaattcctttgcatccacgtgcagctggagccagccgagaa
gcaaaggtgtcccctgctctgcaccagcaggcagttgcatag
DBGET
integrated database retrieval system
