Corvus brachyrhynchos (American crow): 103613035 Help Entry 103613035         CDS       T08418                                  Symbol XRN2 Name (RefSeq) 5'-3' exoribonuclease 2   KO K12619   5'-3' exoribonuclease 2 [EC:3.1.13.-] Organism cbrc  Corvus brachyrhynchos (American crow) Pathway cbrc03008   Ribosome biogenesis in eukaryotes cbrc03018   RNA degradation Brite KEGG Orthology (KO) [BR:cbrc00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     103613035 (XRN2)   09123 Folding, sorting and degradation    03018 RNA degradation     103613035 (XRN2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cbrc03021]     103613035 (XRN2)    03019 Messenger RNA biogenesis [BR:cbrc03019]     103613035 (XRN2)    03009 Ribosome biogenesis [BR:cbrc03009]     103613035 (XRN2)    03016 Transfer RNA biogenesis [BR:cbrc03016]     103613035 (XRN2) Transcription machinery [BR:cbrc03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      103613035 (XRN2) Messenger RNA biogenesis [BR:cbrc03019]  Eukaryotic type   mRNA degradation factors    5'-3' decay     5' exonucleases      103613035 (XRN2) Ribosome biogenesis [BR:cbrc03009]  Eukaryotic type   Pre-60S particles    RNases     103613035 (XRN2) Transfer RNA biogenesis [BR:cbrc03016]  Eukaryotic type   tRNA degradation factors    Rapid tRNA decay (RTD) pathway factors     103613035 (XRN2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  XRN_M XRN_N Motif Other DBs NCBI-GeneID:  103613035 NCBI-ProteinID:  XP_017585908 LinkDB All DBs Position Unknown AA seq 927 aa AA seqDB search RPQAKECNGVKVPIDTSKANPNEVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIF EYIDRIFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAEEKQKIRQEILAK GGFLPPEEVKERFDSNCITPGTEFMDNLAKCLRYYIADRLNSDPGWKNLTVILSDASAPG EGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFKPNKPKP CALCNQMGHEVKDCQGLPREKQGKHDQFADTLPMSEQEFIFIRLCVLREYLERELTMASL PFTFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTGGYLTESG FVNLQRVQMIMLAVGEVEDSIFKKRKDDDDNFKRRQKEKRKRLKRDQPSFIPGGQFSPQA LGNRSSPQAISNPRQAAFEMRMHDRQNSTTSASPNTSLTPDGSPSLGGGIKRKSEDSDSE PEPEDNIRLWETGWKQRYYKNKFDVDASDEKFRRKVVQSYVEGLCWVLRYYYQGCASWNW YYPFHYAPFASDFEGIADMPSDFEKGSKPFKPLEQLMGVFPAASGNFLPPTWRKLMTDPE SSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEESRRNSLGGD VLFVGKHHPLCDFIVEQYKTKNTEAVDIPPELCHGIQGKLTLNDNAVLPDQVVESPVPML RDLTQNSAVSISFKDPQFAEDFVFKATVLPGAKKPAPVLKPGDWEKTNSDGRPWRPQLGF NRDRKPVHLDQSAFRTLGHTMPRDRGMPGMYPNAVPLGAYGSPYARPLMGGQQQIPKLLS NLRPQESWRGPTPLFQQTPQRAAGAAPLLAWNRMLQSPNQFQPAQYQGLGPMGYPQRPED RMDRGRQAYGPGRPYPLPPPAGRYSWN NT seq 2784 nt NT seq  +upstreamnt  +downstreamnt cgtccccaggccaaagagtgcaatggtgtcaaggtccccatcgacacgagcaaagccaac cccaacgaggtggagttcgacaacctctacctggacatgaacggcatcattcacccctgc acgcacccagaggacaagccggcgcccaaaaacgaagatgagatgatggtggcgattttt gagtacatcgacaggatcttcaacattgtgagacccaggagactcctttacatggccata gatggagtggctccacgtgccaaaatgaatcaacagcggtccaggagattcagagcctca aaggagggcatggaagctgctgaggagaagcaaaaaatccgacaagaaattctggccaaa ggtggctttctgcctccagaggaggtgaaggagaggtttgacagcaactgtatcaccccg ggaaccgagtttatggacaatctcgctaaatgcctccgctattacatcgccgaccgcctg aacagcgacccgggctggaagaacctgacagttattttgtcggacgccagtgctcctggt gaaggggaacataaaatcatggattacatcaggaggcaaagagcacaaccaaaccacgac ccgaacactcaccactgtctgtgtggggctgacgctgatctgatcatgcttggcttagct acacacgaaccaaacttcaccatcattagggaagagttcaaaccaaataaacccaagcca tgtgctctctgtaaccagatggggcatgaggttaaggattgccaaggtctgcccagagaa aaacaaggaaagcacgatcagttcgccgacaccctgccgatgtcggaacaggaattcatc ttcatccgcctgtgtgtcctgcgagagtatttggagagagagctcacgatggccagcttg cctttcacctttgattttgaaaggagtgttgatgactgggtcttcatgtgcttctttgtg gggaacgacttcctccctcatctgccatctctggagatcagggagggagcgatcgatcgc ttggttaacatctataaaaacgtggtgcacaaaaccgggggctacctcactgaaagtggg tttgtgaacctgcagcgggtccagatgatcatgctggctgttggggaggttgaagacagt attttcaaaaagaggaaagacgacgatgataactttaaaagacggcagaaagagaaaagg aaaagattgaagagggatcagccttcctttattcctggtggccagttttcccctcaagcc ctgggaaatcgatccagcccgcaggcaatcagtaaccctcgacaagctgcctttgagatg aggatgcatgacaggcagaactctacaacttcagcatctccaaacaccagcctgactcct gatggcagcccgtccctgggaggaggaattaagcggaaatctgaggatagcgacagtgaa cctgagccagaggataatatcaggttgtgggaaaccggttggaagcagcgctactacaaa aacaaattcgacgtggatgcgtcagatgagaaattccgtcgcaaggttgtgcagtcctac gtggaagggctttgctgggttctcagatactactatcagggctgtgcatcctggaactgg tattaccctttccactacgctccctttgcctcggacttcgagggaattgcagacatgccc tcagattttgagaagggctccaaaccgttcaagcctcttgaacagctgatgggggtgttc ccggccgccagtgggaattttctgccgccgacgtggaggaagctcatgacagacccggaa tcaagcatcattgacttctaccctgaagattttgctatcgatttgaatgggaagaagtac gcttggcaaggtgtggcgttgttgccctttgtggatgagcggcgcctcagagctgctctg gaggaagtgtaccctgacctcactcctgaagagagcagaaggaacagccttggcggtgac gttctctttgttgggaagcaccatccgctctgtgacttcattgtggaacagtacaagacc aaaaacacagaggcagtggatatcccgccggagctgtgccacgggatccagggaaagctc acgctgaacgacaacgccgtcctcccggatcaggtggtggagtctcctgttcccatgctg cgggaccttacgcagaactctgcagtcagcatctccttcaaagacccacagtttgctgaa gactttgttttcaaggctaccgtgttacctggggcaaagaaacctgctcccgttctgaag ccaggagactgggaaaaaaccaacagtgatggcaggccttggaggccgcagcttggcttc aacagggacaggaaaccagtgcacttggaccagtcggcgttcagaaccttgggccacacg atgccgagggaccggggcatgccaggcatgtatcccaacgccgtgccgctcggagcttac ggcagcccctacgccaggcccctcatgggcgggcagcagcagatccccaaactgctctca aatcttcgaccccaggagtcctggcgaggtcccacgcccttgttccagcagacgccgcaa agggctgctggagccgctcctctccttgcctggaaccgcatgctgcaatccccaaaccag ttccagccggcccagtaccaggggctgggacccatgggatacccacagcgacccgaggat cgcatggacaggggcagacaggcgtacggccccgggaggccctacccgctcccacctccc gcaggaaggtacagctggaattag

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